KEGG   Diaphorobacter sp. JS3050: HND92_16560
Entry
HND92_16560       CDS       T10221                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
dij  Diaphorobacter sp. JS3050
Pathway
dij03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dij00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HND92_16560 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dij03400]
    HND92_16560 (ruvB)
Enzymes [BR:dij01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HND92_16560 (ruvB)
DNA repair and recombination proteins [BR:dij03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HND92_16560 (ruvB)
    RecFOR pathway proteins
     HND92_16560 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 AAA_16 nSTAND3 AAA_14 AAA_22 AAA_3 Rad17 RNA_helicase AAA_18 NTPase_1 TsaE Bac_DnaA AAA_33 DUF815 ABC_tran AAA_17 Sigma54_activ_2 AAA_28 AAA_24 NB-ARC
Other DBs
NCBI-ProteinID: QJY34437
UniProt: A0A6M6IJ27
LinkDB
Position
complement(3462509..3463579)
AA seq 356 aa
MTIHTDDFAPSPPPARERVVSAAPASSQEEALERALRPKLLQEYVGQAKAREQLEIFIGA
AKKRGEALDHVLLFGPPGLGKTTLSHIIATELGVNLRQTSGPVLEKPKDLAALLTNLERN
DVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGML
TNPLRDRFGIVARLEFYTPDELARIVMRSAGLLGAPIDAEGGMEIARRSRGTPRIANRLL
RRVRDYAEVKGSGHITLDIANRALTMLDVDPQGFDVMDRKLLEAVVHRFDGGPVGLDNIA
ASIGEESGTIEDVIEPYLIQQGYLQRTPRGRVATLAAYRHLGVAPPRAAGGLFESA
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgacgatccataccgacgactttgccccctctccccctccggcgcgcgagcgcgtggtg
tcggccgcgccggcctcctcgcaggaggaagcgctggagcgtgcgctgcgccccaagctg
ctgcaggagtacgtgggccaggccaaggcgcgcgaacagctcgagatcttcatcggcgcg
gccaagaagcgcggcgaggcgctggaccatgtgctgctgttcggcccgccgggcttaggg
aagaccacgctcagccacatcatcgccaccgaactgggcgtgaacctgcgccagaccagc
ggccccgtgctggaaaagcccaaggatctggcagcgctgctcaccaacctggaacgcaac
gacgttctcttcatcgacgagatccaccgcctttcgcccgtggtcgaggaaatcctctac
cccgcgctggaggactaccagatcgacatcatgatcggcgaggggccggccgcgcgcagc
atcaagctggacctgcagcccttcacgctggtgggcgccaccacgcgcgcgggcatgctc
accaacccgctgcgcgaccgcttcggcatcgttgcgcggctggagttctacacgcccgat
gaattggcgcgcatcgtcatgcgatcggccggcctgctgggcgcgcccatcgatgccgag
ggcggcatggaaatcgcgcgccgctcgcgcggcacgccgcgcatcgccaaccgcctgctg
cgccgcgtgcgcgactatgccgaggtgaagggttcgggccacatcaccctggacattgcc
aaccgcgcgctgaccatgctggacgtggatccgcagggcttcgacgtgatggaccgcaag
ctgctggaggccgtggtgcatcgcttcgacggcggccccgtgggactggacaacattgcc
gccagcatcggcgaggagagcggcaccatcgaggacgtcatcgagccctacctgattcag
cagggctatctgcagcgcaccccacgcgggcgcgtggccacgctggccgcctaccgccac
ctgggcgtggcgccgccgcgcgccgcgggcgggctgttcgagtccgcctga

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