KEGG   Diaphorobacter sp. JS3050: HND92_18945
Entry
HND92_18945       CDS       T10221                                 
Name
(GenBank) TrbI/VirB10 family protein
  KO
K20533  type IV secretion system protein TrbI
Organism
dij  Diaphorobacter sp. JS3050
Pathway
dij02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:dij00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HND92_18945
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dij02044]
    HND92_18945
Secretion system [BR:dij02044]
 Type IV secretion system
  Trb secretion system protein
   HND92_18945
SSDB
Motif
Pfam: TrbI Oxidored_q3
Other DBs
NCBI-ProteinID: QJY35047
LinkDB
Position
pDCNB:complement(5287..6666)
AA seq 459 aa
MSDQADQMAPDASPGAVSKKSGVRRVNNMPMYILAAALGAFLLVMMLVAADRAAKQNAPA
QGAAEKAGNTSMFAKEIVGDRDGGTVEAASPLKPPELATGPEAAPVLVARPDLDAPPPPP
SGNLGQPVHDDEADRIRMAKLQMFQEAVKAKTGVRVDAPRSSGSSGAQPGTPQTRDEMLS
RLAAVRQQIGAQASGDPTAAYQARLAQLRASGVGGQQAGGGVGGGAPQLLQTAGGGQGKN
YAQFAGSGQGDRWRLDSQPEAPRSPFELRAGFVVPATLISGINSDLPGQIMAQVAQNVYD
TPTGKHLLIPQGSRLVGSYSSDVAYGQSRVLVAWQRIVFPDGKAMDIGTMPGADSAGYAG
FNDQVNNHYLRVFGSAFLMSGVIAAVSMSQDNSGSTGNQQRASDALSEALGQVLGNTIAQ
LVSKNLNIAPTLEIRPGYRFNVIVTKDMTFSKPYQSFDY
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgagtgaccaagccgatcaaatggcaccggacgcctcgccgggcgcggtatcgaagaag
tccggcgtgcggcgtgtcaacaacatgccgatgtacatccttgcggccgcgctgggtgcc
ttcctgctggtgatgatgctggtcgcggcggatcgcgctgcgaagcagaacgcaccggcg
caaggcgcggccgagaaggcgggtaacacgtcgatgttcgccaaggagatcgtcggcgac
agggatggcggcacggtagaagcggcctcgccgctcaagccgccggagctggcgaccggg
ccagaggctgcgccggtgcttgtcgcgcgccccgacctggacgcgccgccgccaccgccc
agcggcaacctgggccagccggtgcatgacgatgaagccgaccgcatccgcatggcgaag
ctgcaaatgttccaggaagcggtcaaggccaagacgggcgttcgtgtcgatgcgccgcgc
agcagcgggtcatcgggcgcgcagccgggcacgccgcagacgcgcgacgaaatgctgtcc
cgcctggcggctgtgcggcagcaaatcggtgcgcaagcatcgggcgatccgaccgccgcc
tatcaggcccggctcgcgcagcttcgcgcctcgggcgtcggcggccagcaggccggcggc
ggcgtgggtggtggtgcgccgcagctcttgcaaaccgccggtggcggccagggcaagaac
tacgcgcagttcgcgggaagcggccagggcgaccgttggcggctggactcccagcccgaa
gcgccgcgctcgcccttcgagctgcgcgccggcttcgtggtgccggccacgctcatttcg
ggcatcaactccgacttgccgggccagatcatggcccaggtcgcgcagaacgtgtacgac
acgccgaccggcaagcatctgctgattccgcaaggctcgcgcctggtcgggtcgtattcg
agcgatgttgcctacggtcagtcgcgcgtgcttgtggcttggcagcgcatcgtgttcccc
gatggcaaggcgatggacattggcacgatgccgggcgcggatagcgccgggtacgcgggc
ttcaatgaccaggtgaataaccactacctgcgcgtgttcggctcggccttcctcatgtcg
ggcgtcatcgccgccgtgagcatgagccaggacaacagcggttccaccggcaatcagcag
cgcgccagcgatgctttgagcgaagcacttgggcaagtgctgggcaacaccatcgcccaa
ctcgtttccaagaatctgaacattgccccgaccttggaaatccgccccggctatcggttc
aacgtcatcgtgaccaaggacatgacgttctcgaagccgtaccaatcgtttgactactaa

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