Diaphorobacter sp. MNS-0: K2L43_04905
Help
Entry
K2L43_04905 CDS
T10618
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dim Diaphorobacter sp. MNS-0
Pathway
dim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K2L43_04905 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dim03019
]
K2L43_04905 (pnp)
03016 Transfer RNA biogenesis [BR:
dim03016
]
K2L43_04905 (pnp)
Enzymes [BR:
dim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K2L43_04905 (pnp)
Messenger RNA biogenesis [BR:
dim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K2L43_04905 (pnp)
Transfer RNA biogenesis [BR:
dim03016
]
Prokaryotic type
tRNA degradation factors
K2L43_04905 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
TraK_C
KH_KhpA-B
DUF4164
Motif
Other DBs
NCBI-ProteinID:
QYY26511
LinkDB
All DBs
Position
1018914..1021097
Genome browser
AA seq
727 aa
AA seq
DB search
MSIFNKVTKSFQWGDKTVVMETGEIARQASGAVLVNIDDTVVLATVVGSKQAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPEGFYNEVHVVIHTI
SLNPEVDADIAAMIAVSAALSVSGIPFNGPIGAARVGYVNGEYVLNPGQTARKSSQLDLV
VAGTEAAVLMVESEAQQLSEEIMLGAVVFGHEQGKVAINAIHELVRDAGKPVWDWQPPAK
DETFIAKVAALAEDKLRAAYQIRSKQARTQALREASASVLESLKGEGVEFDAVKVEALLF
DIEAKIVRSQILAGEPRIDGRDTRTVRPIEIRNSVLPRTHGSALFTRGETQALVVSTLGT
ERDAQRIDALAGEFEDRFIFHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALVACLPSK
DEFPYTIRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKEDNRFAVL
TDILGDEDHLGDMDFKVAGTTNGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKTEISSFAPKLYTMKINPEKIRDVIGKGGATIRALTDETGCQINIEEDGTITIA
ATEAAKADEAKRRIEEITAEVEVGKIYEGPVTKILDFGALINLLPGKDGLLHISQIAHER
VEKVGDYLQEGQIVKVKVLETDDKGRVKLSMKALADRPAGDSGRPAPAERGERRERRDGG
ASEQQQQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttttaacaaggtcaccaagtcgttccagtggggtgacaagaccgttgtcatg
gaaacgggtgagatcgcacggcaggcctcaggcgccgtgctggtgaacattgacgacacc
gtagtgctcgctaccgtggtggggtccaagcaggccaagcctggccaggacttcttcccg
ctgacggtggactacatcgagaagacctacgccgccggcaagatccccggcagcttcttc
aagcgcgaggccaagcccagcgagttggagacgctgaccagccgcctgatcgatcgcccg
atccgcccgctgttccccgagggcttttacaacgaggtgcatgtggtcatccacaccatc
tcgctcaaccccgaagtggacgctgacatcgccgccatgatcgccgtgagcgcagcgctg
tccgtttccggtattccgttcaatggccccatcggcgccgcacgcgtgggctacgtcaat
ggcgaatacgtgctgaaccccgggcagaccgcgcgcaagagctcgcagctggacctggtg
gtggcgggcaccgaggccgctgtgctgatggtggagtccgaagcgcagcagctgtccgaa
gagatcatgctgggcgccgtggtgttcggccacgagcagggcaaggtggcgatcaacgcc
atccatgagctggtgcgcgacgctggcaagcccgtgtgggactggcagccgcctgccaag
gatgagactttcatcgccaaggtcgcggccctggcagaggacaagctgcgcgcggcttac
cagatccgcagcaagcaggcccgcacccaggccttgcgcgaggcatcggcctcggtgctg
gaatcgctgaagggcgagggcgtggagttcgacgccgtgaaggtcgaggccctgctgttc
gacatcgaagccaagatcgtgcgcagccagatcctggccggcgagccccgcatcgacggc
cgcgacacgcgcaccgtgcgccccatcgagatccgcaactccgtgctgccgcgcacccac
ggctccgccctgttcacgcgtggcgagacccaggcgctggtggtgtccacgctgggcacc
gagcgcgatgcgcagcgcatcgacgcactggccggcgagttcgaagaccgtttcatcttc
cactacaacatgcctcccttcgccacgggtgaagtgggccgcatgggctcgaccaagcgc
cgcgaaatcggccacggccgcctggccaagcgcgccctggtggcctgcctgccgagcaag
gacgagttcccctacaccatccgcgtggtgtcggagatcaccgaatccaacggctcctcg
tccatggcatcggtctgcggcggctgcctgtcgctgatggatgccggcgtgcccatgaag
gcgcacgtggccggcatcgccatgggcctgatcaaggaagacaaccgcttcgccgtgctg
accgacatcctgggcgatgaggaccacctgggcgacatggacttcaaggtggccggtacg
accaacggcatcaccgccctgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtcgccctggcgcaggccaaggaagcacgtatgcacatcctgggcaagatgcag
gaagccatgggtgaagccaagaccgagatttcgtccttcgcgcccaagctctacacgatg
aagatcaaccccgagaagatccgcgacgtgatcggcaagggcggcgccacgatccgtgcc
ctgacggacgagaccggctgccagatcaacatcgaggaagacggcaccatcaccatcgca
gccaccgaggctgccaaggctgatgaagccaagcgccgcatcgaagagatcacggctgag
gttgaagtgggcaagatctacgaaggccctgtcaccaagatcctggacttcggcgcgttg
atcaacctgctgcccggcaaggacggcctgctgcacatcagccagatcgcccacgagcgt
gtggaaaaggtgggcgactacctgcaggaaggtcagatcgtgaaggtcaaggtgctggag
accgacgacaagggccgcgtcaagctgtccatgaaggcgctggctgaccgccccgccggc
gacagcggccgtcccgcccctgcggagcggggcgagcgtcgtgagcgccgtgatggcggt
gcttccgagcaacagcagcagtaa
DBGET
integrated database retrieval system
