Diaphorobacter sp. MNS-0: K2L43_08395
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Entry
K2L43_08395 CDS
T10618
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dim Diaphorobacter sp. MNS-0
Brite
KEGG Orthology (KO) [BR:
dim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dim03400
]
K2L43_08395
Enzymes [BR:
dim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K2L43_08395
DNA repair and recombination proteins [BR:
dim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K2L43_08395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QYY27124
LinkDB
All DBs
Position
1736874..1739444
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AA seq
856 aa
AA seq
DB search
MTPIAKDDHAAACSAGWRAVFEQVRSAAAQRGAHLAATVVLVPYAQLMGEARRQWQRAYP
QGFAPRFETTRNWASQLGAPLAEGSEYAGDMARDAVTARALLDRAGLAAHREVLSGPLLE
MAAQLAVVAAAVAPDRRPDWGEAARALLPAAGDGGALRLEAAAARIALEWVLASRHVGDV
LFESGVRAAVPLLVVVQGFQPDPLARTLARHWAEAGLVVDLPQVMDGRKAGVPTLHAVPD
AEDEAQRAAACVLQHLAQGQAPVALVANDRALTRRISALLGGAGVAVHDENGWLLSTTHA
AARLMAVLQACAWDATADAVLDWLKQSPAVDGAALRALEHWLRRAGARHWSGAATQLQAL
AERRPAEAALADQVQVWRAQLRAARPLAQWLQSLRVLLQDCGLWDGLQQDEAGARVLAEL
RLPEGLQDDLQDMDGAGARMALADFTRWVGEVLECARYRPAYVDDAPVVVLPLPQLLARP
FAALVLPGCDEKRLQAAPEPPGPWTQAQREGLGLPTRDLLAAAQRAAWRQALRIARVDLL
WRVGDEGGEPLLPSPLVQALRLDGPGTDGADPRVTRSVPVAPTARPLPVGAQLPVQRLSS
SAYSDLRHCPYRFFALRQLQLQEDDELDAGLDKRDFGTWLHAVLQHFHEALQDAPTGDAA
ARTALMDEAAARATRELGLQEGDFLPYASGWPALRAGYLEWLGKHEAAGACFRQAELRAR
QPLGALELVGTLDRVDAVRPQGGGEPLTLVIDYKTESDALTRERIKAGAEDTQLAFYAAL
LQDDTLRAAYVNVGERGETRLHEQDDVVHLRDLLLDGITHDMQRIAAGAPLPALGEGSVC
EWCAARGLCRKDFWNE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatagcaaaagacgatcacgccgcagcgtgcagcgcggggtggcgcgcggtt
ttcgagcaggtgcgctcagcggctgcgcagcgcggcgcgcacctggcggccaccgtggtg
ctggtgccgtacgcccagctcatgggcgaggcgcgccggcaatggcagcgcgcctacccg
cagggtttcgcgccgcgcttcgagaccacgcgtaactgggcttcccagctgggcgcgcct
ctggcggagggcagcgagtacgcgggcgatatggcgcgcgatgcggtcaccgcacgtgca
ttgctcgaccgcgccggtcttgccgcgcaccgcgaagtcctcagcggtccgctgctggag
atggccgcgcagttggcggtggtggcagcggccgtggctcctgaccggcgcccggactgg
ggcgaagcggcgcgcgccctgctgccggcggcgggcgacggtggcgcgctccggctggag
gccgccgcagcgcgcatcgccctggaatgggtgctggcctcgcgccacgtgggggatgtg
ctgttcgagtctggcgtgcgtgcggccgtgccgctgctggtggtggtgcagggcttccaa
cccgaccccctggcccgcacgctggcacggcactgggcggaggcgggccttgtcgtggac
ctgccgcaggtgatggacggcaggaaggccggcgtgccaaccttgcatgccgtgcccgat
gccgaggacgaggcccagcgtgccgccgcctgtgtgctgcagcacctggcgcagggacag
gcgcccgtggcactggtggccaacgaccgcgcgctcacccgccgcatcagcgccttgctc
ggcggcgcaggcgtggctgtgcacgacgaaaacggctggctgctctccaccacccacgct
gcggcgcggctgatggcggtgttgcaggcctgtgcctgggacgccaccgccgatgccgtg
ctcgactggctcaagcagtcgcccgcggtggatggggccgcactgcgcgcgctggagcac
tggctgcgccgtgcgggcgcccggcattggagcggcgcggcgacgcaactgcaggcgttg
gctgagcggcgcccggccgaggccgcgttggcggaccaggtacaggtctggcgcgcgcag
ctgcgggccgcgcggccgctggcccagtggttgcagtcgctgcgcgtgctgctgcaggac
tgcggcctgtgggacgggctgcagcaggacgaggccggtgcgcgcgtgctggccgagctg
cgcctgcccgagggcctgcaggacgatctgcaggacatggacggggccggtgcgcgcatg
gcgctggcggacttcacacgctgggtgggggaggtgctggaatgcgcgcgctatcgaccg
gcctatgtggacgatgcacccgtggtggttctgcccctgccgcagctgctggcgcgcccg
ttcgctgcgctggtgctgcccggctgcgatgagaaacgcctgcaggccgcgcctgaaccg
cccggcccctggacgcaggcgcagcgcgagggactggggctgcctacgcgcgacctgttg
gccgccgcgcagcgcgccgcctggcggcaggccctgcgtattgcgcgtgtcgacctcctg
tggcgcgtgggtgacgaggggggcgaacccctcctgccgagtccgctggtccaggcgctt
cggctggacggacccggcacggacggtgccgatccccgggtgacgcgcagcgtgcccgtg
gcacccacggcgcgtccgctgccggtgggcgcgcagctgccggtgcagcggctatcgtcc
tcggcatattccgacctgcgccactgtccttaccgcttcttcgcgctgcgccaactgcag
ctgcaggaagacgacgaactggacgccgggctggacaaacgtgacttcggcacctggctg
catgccgtgctgcagcacttccatgaggcgttgcaggacgcgcccacgggcgacgccgcg
gcgcgcacggcgctcatggacgaggcggctgcgcgcgccacacgcgagctggggctgcag
gagggcgacttcctgccctacgcctcgggctggcccgcgctgcgcgccggctatctggaa
tggctgggcaagcacgaagccgctggcgcctgttttcgccaggccgagctgcgcgcgcgc
cagccgctgggcgcgctggaactggtcggcacactggaccgtgtggacgccgtgcgtccg
cagggcggcggcgaacccctcacgctggtgatcgactacaagaccgagagcgacgccctc
acgcgcgagcgcatcaaggccggggccgaggacacgcagctggccttctacgccgcgttg
ctgcaggacgacaccttgcgggccgcgtacgtgaatgtgggtgagcgcggcgaaacccgg
ctgcacgagcaggacgacgtggtgcacctgcgcgacctgctgctggacggcatcacgcac
gacatgcagcgcattgccgccggcgcgccgctgcccgcgttgggcgagggcagcgtgtgc
gaatggtgcgccgcgcgcggtctgtgccgcaaggatttctggaatgagtga
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