Diaphorobacter sp. MNS-0: K2L43_09010
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Entry
K2L43_09010 CDS
T10618
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
dim Diaphorobacter sp. MNS-0
Pathway
dim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K2L43_09010 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dim03400
]
K2L43_09010 (uvrB)
DNA repair and recombination proteins [BR:
dim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K2L43_09010 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K2L43_09010 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
UB2H
P-loop_SecA
Orbi_NS3
Motif
Other DBs
NCBI-ProteinID:
QYY27388
LinkDB
All DBs
Position
1869241..1871259
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AA seq
672 aa
AA seq
DB search
MYQPYPPAGDQPEAIAKLVEGVQDGEVFQTLLGVTGSGKTFTMANVIARLGRPAIIFAPN
KTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQMRLSC
TKSLLERRDVVIVATVSAIYGIGEPESYHRMIMTLRVGDQLSQRDAIAQLIRMQYQRNEQ
DFSRGKFRVRGDTIDVFPAEHSELAVRIELFDDEVESLQLFDPLTGRIQQKIPRFTVYPS
SHYVTPRDKVLAAVETIKQELDERLKFFVAEGKLVEAQRLEQRTRFDLEMLSEVGHCKGI
ENYTRHLSGSAPGEPPSTLTDYLPPDALMFLDESHQMIGQLNAMYNGDRARKTTLVEYGF
RLPSALDNRPLKFEEFEKRMRQVVFVSATPADYEKEHSGQVVDQVVRPTGLVDPEVEVRP
ATHQVDDVLQEIRICTQKNQRVLITTLTKRMAEQLTDYLSDNGVKVRYLHSDIDTVERVE
IIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAARNLH
GKAILYADRITDSMRKAISETERRRAKQIAYNEARGITPRSIVKQVRDLIDGVYSEKAGQ
EAQRLREDAARQAELEEMSEKDIAREIKRLEKLMLEHARNLEFEQAARVRDQLTRLKDRV
FGAHGGDQIPAA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
ttgtaccagccatacccgcccgccggtgatcagcccgaggccatcgccaagctggtggag
ggcgtgcaggacggcgaggtgttccagaccctgctgggggtgacgggctcgggcaagacc
ttcaccatggcgaacgtgatcgcccgcctgggacggccggccatcatcttcgcgcccaac
aagacgctggccgcacagctgtacagcgagttccgcgagttcttccccaagaacgccgtg
gagtacttcgtgagctattacgactactaccagcccgaggcctacgtgcctcagcgcgac
ctgttcatcgagaaggacagcgccatcaacgagcacatcgagcagatgcgcctgtcgtgc
accaagagcttgctggagcggcgcgatgtggtcatcgtggccaccgtgtcggccatctac
ggcattggcgagcccgagagctaccaccgcatgatcatgacgctgcgcgtgggcgaccag
ctgagccagcgtgacgcgatcgcgcagctgatccgcatgcagtaccagcgcaacgagcag
gacttcagccggggcaagttccgcgtgcgtggcgacaccatcgatgtgttccctgccgag
cattccgagctggcggtgcgcatcgaactgttcgacgacgaggtggaaagcctgcagctt
ttcgacccgctcacggggcgtatccagcaaaaaatcccgcgcttcacggtgtaccccagc
agccattacgtcacgccgcgcgacaaggtgctggcggccgtggagaccatcaagcaggaa
ctggacgagcggctcaagttcttcgtggccgagggcaagttggtggaggcgcaacggctg
gagcagcgcacgcgcttcgacctggaaatgctcagcgaagtggggcactgcaagggcatc
gagaactacacgcgccacctgtcgggttctgcgcctggcgagccgccgagcacgctgacc
gactacctcccgcccgatgcgctgatgttcctggatgagagccaccagatgatcgggcaa
ctcaacgccatgtacaacggcgaccgcgcgcgtaagactacgctggtcgagtacggcttt
cgcctgccgtcggcattggacaaccggccgctcaagttcgaggagttcgagaagcgcatg
cggcaggtggtgtttgtatcggccactccggctgattatgagaaggagcactcgggccag
gtggtggaccaggtggtacggcccaccggcttggtggacccggaggtggaggtgcgtccc
gctacccatcaggtggatgacgtgctgcaggaaatacgcatttgcacgcaaaagaatcaa
cgcgtactcattacgacgctgacgaagcgcatggcggagcaactgaccgattacctgagc
gacaacggggtcaaggtgcgctatctgcactccgatatcgacaccgtggagcgtgtggaa
atcattcgcgacctgcgcctgggagccttcgatgtcctggtggggatcaacctgctgcgt
gaggggctggacattcctgaggtctccctggtggccatcctggatgccgacaaggagggt
ttcctgcgcgccgaacgcagcctgatccagaccatcggccgggcggcgcgcaacctgcac
ggcaaggccatcctgtatgccgaccggatcaccgactcaatgcgcaaggcgatcagcgaa
acggaacgccgccgcgccaaacagatcgcatacaacgaggcccggggtattacgccgcgc
agcatcgtcaagcaggtgcgagacctgattgacggcgtgtacagcgagaaggcaggccag
gaagcccagcgactccgcgaagatgcggcgcggcaggccgaattggaggagatgtccgaa
aaggacattgcccgcgaaatcaagcggctggaaaagctcatgctggaacacgcccgcaac
ctggagtttgagcaggctgctcgggtgcgcgatcaattgacccgtctcaaggaccgggtg
tttggagcgcatggcggcgatcaaatccctgccgcatga
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