Diaphorobacter sp. MNS-0: K2L43_09650
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Entry
K2L43_09650 CDS
T10618
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dim Diaphorobacter sp. MNS-0
Pathway
dim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K2L43_09650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dim03000
]
K2L43_09650
03400 DNA repair and recombination proteins [BR:
dim03400
]
K2L43_09650
Enzymes [BR:
dim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
K2L43_09650
Transcription factors [BR:
dim03000
]
Prokaryotic type
Helix-turn-helix
AraC family
K2L43_09650
DNA repair and recombination proteins [BR:
dim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K2L43_09650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QYY24015
LinkDB
All DBs
Position
2011100..2012650
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AA seq
516 aa
AA seq
DB search
MPDVLHSPAPPASTASAADDEARYLALRARDARFDGRFFTGVTSTGIYCRPVCAVRTPRR
ENCRFFTLAAQAESAGFRPCLRCRPELAPQALAWSVQDASGILVRQALRMLDAPQSWGAC
EGGAVVAQLAARLGVSDRHLRRIFEAALGISPLQYLQTRRLLAAKQLLTDTDLPVTQVAL
ASGFASVRRFNAAFNTHYGLNPTQLRRQGAAPDGVQAGARAVRLGLRPPYDTAALMGFLA
ARQIHGMESIRTGPGAQVLRRTVRLASAGTVFTGWLEAGFDDGRPQLWLRVSDGLQPVLP
QLIARVRALFDLDADPQAINAVLHPSFPEGDGLRVPGAFDGFELAVRAVLGQQITVAAAR
TLAQRLVERFGEPIATPWPDLHRLFPTPAALAAAQGDALGSLGIVRQRQAAIVALAQAMD
AGTLLLDASADVPATLDALRALPGIGDWTAQYIAMRALRWPDAFPAGDVALHKALGVQGQ
PQPARAATEAARDWRPWRSYGVLRAWSGLALALSDQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgttcttcattcccctgctccacccgccagcaccgcctctgcggccgacgac
gaggcccgctacctggccctgcgggcccgggatgcgcggtttgacggacggttcttcacc
ggcgtgacctccaccggcatctactgccgccccgtctgtgccgtacgcacgccccggcgc
gaaaactgccgtttttttacgctggcggcgcaggccgagagtgccggctttcgcccctgc
ctgcgctgtcggcccgagctggcgccgcaggcgctggcctggtcggtgcaggacgcatcg
ggcatcctcgtgcgccaggcgctgcggatgctggatgcgccgcagtcctggggcgcgtgc
gaaggcggcgccgtggtcgcgcagctggctgcgcgcctgggcgtgagcgaccggcacctg
cgccgcatcttcgaggccgcgctgggcatctcgccgctgcagtacctgcagacgcgccgg
ctgctggcggccaagcagttgctgaccgataccgatctgcccgtcacccaggtggcgctg
gccagcgggtttgccagcgtgcgccgcttcaacgcggctttcaatacccactacggactc
aatcccacccagttgcgccggcaaggcgccgcacccgatggggtacaggcaggcgctcga
gcggtgcgtctgggcctgcgcccgccctacgacacggccgcgctgatgggctttctggcg
gcgcggcagatccacggcatggagagcatccgcaccgggccgggggcgcaggttctgcgc
agaacggtgcggctggcaagcgcgggcaccgttttcaccggctggctggaagccggcttc
gatgacgggcgcccccagctgtggctgcgcgtcagcgacggcctgcagcccgtgctgccg
cagctcatcgcgcgggtgcgcgcattgttcgacctggacgcggacccgcaggccatcaac
gcggtgctgcacccctccttcccggagggcgacggcctgcgtgtgccgggcgcgttcgac
ggcttcgagctggcggtgcgcgccgtgctgggccagcagatcacggtggccgccgcgcgc
acgctggcgcagcggctggtggaacgctttggcgagcccatcgccacgccatggccggac
ctgcatcggctgtttcccacaccggccgctctggccgcggcgcaaggggacgcactgggc
agcctgggcatcgtgcgccagcggcaggccgccatcgtggcgcttgcgcaggccatggac
gcgggcacgctgctgctggatgccagcgccgacgtacccgccacgctggacgcgctgcgt
gccctgcccggtattggcgactggacggcgcagtacatcgccatgcgcgccctgcgctgg
cccgacgcctttccggccggggacgtggcgctgcacaaggcgctgggcgtgcagggccag
ccgcaacccgcgcgcgccgccaccgaggcagcgcgcgactggcgcccctggcgcagctat
ggcgtgctgcgcgcgtggagtggtttggctctggcgctatcagaccaatag
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