KEGG   Diaphorobacter sp. MNS-0: K2L43_10370
Entry
K2L43_10370       CDS       T10618                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
dim  Diaphorobacter sp. MNS-0
Pathway
dim03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    K2L43_10370 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dim03400]
    K2L43_10370 (sbcB)
Enzymes [BR:dim01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     K2L43_10370 (sbcB)
DNA repair and recombination proteins [BR:dim03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     K2L43_10370 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     K2L43_10370 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      K2L43_10370 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: QYY24142
LinkDB
Position
complement(2167114..2168553)
AA seq 479 aa
MHTFLWHDYETFGANTRRDRPAQFAAVRTDAELNEIGEPLMIYCRPANDYLPDPQSCLIT
GITPQLCLEKGLPEREFAARIEAELALPGTIGVGYNTIRFDDEITRFMFWRNLMDPYARE
WQNQCGRWDLLDVVRLTYALRPEGIAWPEVDGKPSFRLEHLSKANGLAHDAAHDALSDVR
ATIALARLIRSSNPRLFDFALSLHKKDRVAAELRLPTTAQEARPFLHVSGMFPAERGCLA
VMWPLASHPTNKNELLAWDLAQDPSELARLSADEIRTRLFTRAADLPEGVTRLPLKSVHL
NKSPMVVGNLNTLTPAMAQRWGIDLPQAALHAAAARALPDLTAVWAQVFQRPAEGPLDVD
QDLYGGFVGNEDRRRLNRLRALPGEELAHERLGFDDARLAELVWRYRARNFPHTLSPEEQ
ERWEAHRVAMLVEGEGGGLTFDALFERLDTLGAEADDERTEAILGAVYDYAESIAPGMD
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgcacacttttctctggcacgactacgaaacctttggcgccaacacgcgccgcgaccgc
cccgcacagttcgccgccgtccgcaccgatgccgagctcaacgagatcggcgagccgctg
atgatctactgccgcccggccaacgactacttgccggatccgcagtcgtgcctgatcacc
ggcatcacgccccagctgtgcctggaaaagggtttgcccgagcgcgaattcgccgcccgc
atcgaggccgagctggcgctgccgggcaccatcggcgtgggctacaacaccatccgtttc
gacgacgagatcacgcgcttcatgttctggcgcaatctcatggacccctatgcgcgcgag
tggcagaaccagtgcggccgctgggacctgctggatgtggtgcgcctgacctacgcgctg
cgccccgagggcatcgcgtggcccgaggtggacggcaagcccagcttccgcctggagcat
ctgtccaaggccaacggcctggcgcacgacgccgcgcacgacgcgctgtcggacgtgcgc
gcgaccatcgcgctggcgcggctcatccgttcaagcaacccccggctgttcgacttcgcg
ctgtccctgcacaagaaggaccgcgtggcggctgagctgcgcctgcccaccacggcgcag
gaggcacggccgttcctgcacgtctcgggcatgttccccgccgaacgcggctgcctggcc
gtgatgtggccgctggccagccacccgaccaacaagaatgagctgctggcctgggacctg
gcgcaagacccttccgagctggcacggctgtccgctgacgagatccgcacgcgcctgttc
acgcgcgcagccgacctgcccgagggcgtgacacgcctgccgctcaagagcgtgcacctg
aacaagtcgccgatggtggtgggtaacctcaatacgctcacgccggccatggcgcagcgc
tggggcatcgacctgccacaggccgcgctgcatgccgccgcggcgcgcgcgttgcccgac
ctgacagccgtgtgggcccaggtgttccagcgccctgcggaggggccgctggatgtggac
caggacctgtacgggggcttcgtgggcaatgaggaccgccgccgcctgaaccgtctgcgc
gcattgcccggcgaagagttggcgcacgagcgcctgggttttgacgacgcgcgcctggcc
gagctggtctggcgctaccgtgcgcgcaacttcccgcacacgctctcgcccgaggagcag
gagcgctgggaggcgcaccgcgtcgccatgttggtggagggcgagggcggcgggctgacg
ttcgacgcgctgttcgagcgcctggacacgctgggtgccgaggccgatgacgaacgcacc
gaggccatcctcggcgcggtatacgactacgccgagagcatcgcgcccggcatggactga

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