Diaphorobacter sp. MNS-0: K2L43_10370
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Entry
K2L43_10370 CDS
T10618
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
dim Diaphorobacter sp. MNS-0
Pathway
dim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K2L43_10370 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dim03400
]
K2L43_10370 (sbcB)
Enzymes [BR:
dim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
K2L43_10370 (sbcB)
DNA repair and recombination proteins [BR:
dim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K2L43_10370 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K2L43_10370 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K2L43_10370 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QYY24142
LinkDB
All DBs
Position
complement(2167114..2168553)
Genome browser
AA seq
479 aa
AA seq
DB search
MHTFLWHDYETFGANTRRDRPAQFAAVRTDAELNEIGEPLMIYCRPANDYLPDPQSCLIT
GITPQLCLEKGLPEREFAARIEAELALPGTIGVGYNTIRFDDEITRFMFWRNLMDPYARE
WQNQCGRWDLLDVVRLTYALRPEGIAWPEVDGKPSFRLEHLSKANGLAHDAAHDALSDVR
ATIALARLIRSSNPRLFDFALSLHKKDRVAAELRLPTTAQEARPFLHVSGMFPAERGCLA
VMWPLASHPTNKNELLAWDLAQDPSELARLSADEIRTRLFTRAADLPEGVTRLPLKSVHL
NKSPMVVGNLNTLTPAMAQRWGIDLPQAALHAAAARALPDLTAVWAQVFQRPAEGPLDVD
QDLYGGFVGNEDRRRLNRLRALPGEELAHERLGFDDARLAELVWRYRARNFPHTLSPEEQ
ERWEAHRVAMLVEGEGGGLTFDALFERLDTLGAEADDERTEAILGAVYDYAESIAPGMD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcacacttttctctggcacgactacgaaacctttggcgccaacacgcgccgcgaccgc
cccgcacagttcgccgccgtccgcaccgatgccgagctcaacgagatcggcgagccgctg
atgatctactgccgcccggccaacgactacttgccggatccgcagtcgtgcctgatcacc
ggcatcacgccccagctgtgcctggaaaagggtttgcccgagcgcgaattcgccgcccgc
atcgaggccgagctggcgctgccgggcaccatcggcgtgggctacaacaccatccgtttc
gacgacgagatcacgcgcttcatgttctggcgcaatctcatggacccctatgcgcgcgag
tggcagaaccagtgcggccgctgggacctgctggatgtggtgcgcctgacctacgcgctg
cgccccgagggcatcgcgtggcccgaggtggacggcaagcccagcttccgcctggagcat
ctgtccaaggccaacggcctggcgcacgacgccgcgcacgacgcgctgtcggacgtgcgc
gcgaccatcgcgctggcgcggctcatccgttcaagcaacccccggctgttcgacttcgcg
ctgtccctgcacaagaaggaccgcgtggcggctgagctgcgcctgcccaccacggcgcag
gaggcacggccgttcctgcacgtctcgggcatgttccccgccgaacgcggctgcctggcc
gtgatgtggccgctggccagccacccgaccaacaagaatgagctgctggcctgggacctg
gcgcaagacccttccgagctggcacggctgtccgctgacgagatccgcacgcgcctgttc
acgcgcgcagccgacctgcccgagggcgtgacacgcctgccgctcaagagcgtgcacctg
aacaagtcgccgatggtggtgggtaacctcaatacgctcacgccggccatggcgcagcgc
tggggcatcgacctgccacaggccgcgctgcatgccgccgcggcgcgcgcgttgcccgac
ctgacagccgtgtgggcccaggtgttccagcgccctgcggaggggccgctggatgtggac
caggacctgtacgggggcttcgtgggcaatgaggaccgccgccgcctgaaccgtctgcgc
gcattgcccggcgaagagttggcgcacgagcgcctgggttttgacgacgcgcgcctggcc
gagctggtctggcgctaccgtgcgcgcaacttcccgcacacgctctcgcccgaggagcag
gagcgctgggaggcgcaccgcgtcgccatgttggtggagggcgagggcggcgggctgacg
ttcgacgcgctgttcgagcgcctggacacgctgggtgccgaggccgatgacgaacgcacc
gaggccatcctcggcgcggtatacgactacgccgagagcatcgcgcccggcatggactga
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