Diaphorobacter sp. MNS-0: K2L43_10410
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Entry
K2L43_10410 CDS
T10618
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dim Diaphorobacter sp. MNS-0
Pathway
dim03030
DNA replication
dim03430
Mismatch repair
dim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K2L43_10410 (dnaE)
03430 Mismatch repair
K2L43_10410 (dnaE)
03440 Homologous recombination
K2L43_10410 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dim03032
]
K2L43_10410 (dnaE)
03400 DNA repair and recombination proteins [BR:
dim03400
]
K2L43_10410 (dnaE)
Enzymes [BR:
dim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K2L43_10410 (dnaE)
DNA replication proteins [BR:
dim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K2L43_10410 (dnaE)
DNA repair and recombination proteins [BR:
dim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K2L43_10410 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QYY24150
LinkDB
All DBs
Position
complement(2176893..2180432)
Genome browser
AA seq
1179 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTTRIDEVVKAAAKDGQPALAITDLNNLFGAIKFYKEGRGKGVKP
ILGAEIYLEGEAAGAPSRMVLLVQNRTGYLNLSELLTRAWTRNIVKNQALCTWQWLQELG
DGLIALAGAQAGPVGQALMKGDDAGAAQLALRLAGIFPHRFYLEVQRAGRTDDEAHVTAA
VQLAARLALPVVATHPVQFATPDDYEAHEARVCIAEGEILANPRRVRRFTREQYFKSSAE
MEALFADVPSALANTVEVAKRCNVSLVLGKPQLPNFPIPGGMTMEQYFRHASHEGLEERL
LHLYPDTAERDRQRPRYQERLEFELGTILKMGFPGYFLIVGDFIQWAKKNGCPVGPGRGS
GAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQANRDRVIDYVKDKYGK
EAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGQTYTLAYPPEPKKEGD
KNNYALELEPILYERVRKEEDVRTIIEMAQKLEGMTRNIGMHAGGVLIAPGKLTDFCPLY
QQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIMQRHKGQENFAFENIPL
DDAATYKLFSDGKTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPMDLIPSFVN
RKHGKEVVEYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGKKKAE
EMAEHRAIFRKGAAEKGISQDKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHY
TAEFYCANMTVEMDDTDKLKVLYEDAVKHFGMTFEPPDINRGNYRFEPVTDKVIRYGLGA
VKGTGQQAIEAIIAAREGQGVGPQGATRGPFKSLFDFCVRVDRTRVNKRTVEALIKAGAF
DALQLNRAALVASLDRAFEFANAQIANANQGGLFDMMGDDAIGSSTQEPDLVDVMPWGIK
ERLMQEKTAVGFYLSGHLFDEVHQEVRRFVRTAIDELVDSRETQVVAGIVSDYRVINGQR
GRLALFKLDDKSGVIEASADEGLINANAGLLKDDEFVVVSGRLQLDHFSGGLRMKVQQVW
DLAGARARYGRYLQVCLGQQLPDIGALVRDYPPQREETEHGEVLAHGLRVRMQLRCTAAA
GAATAEVQLGEASRFFPSDAALAAWSAQAGSGAVNVVYE
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccacttgcgcttgcacactgaattttccgtcgtggacggaaccacccgtatc
gacgaggtcgtcaaggcggcggcgaaagacggccagcccgccctggcgatcactgacctg
aacaacctgttcggcgcgatcaagttctacaaggaaggccggggcaagggcgtcaagccc
atcctgggcgccgaaatctacctggagggcgaagcggcaggcgcaccctcgcgcatggtg
ctgctggtgcagaaccgcaccgggtatctgaacctctccgaactgctgacccgcgcgtgg
acgcgcaacatcgtcaagaaccaggcgctgtgcacctggcagtggctgcaggaattgggc
gacggcctgattgccctcgctggagcgcaggccggtcccgtggggcaggcgctcatgaag
ggcgatgacgccggagctgcgcagctggcgctgcgtctggcgggcatcttcccgcaccgc
ttctacctggaggttcagcgcgccggacgcactgacgacgaagcccatgtcaccgccgcg
gtgcagcttgccgcgcgcctggccctgccggtggtagccacccacccggtgcagttcgca
acgccggacgattacgaggcgcacgaggcgcgcgtgtgcattgccgagggcgagatcttg
gcgaatccgcggcgcgtgcgccgtttcacgcgcgagcagtatttcaagagcagtgccgag
atggaagcgctgttcgccgacgtacccagcgccctcgccaacaccgttgaggtggccaag
cgctgtaatgtgtcgctggtgctgggcaagccgcaactgccgaacttccccattccgggt
gggatgacgatggagcagtacttccgccacgcgtcccatgagggcctggaggagcggctg
ctgcacctgtacccggacaccgccgagcgcgaccgccagcgcccccgctaccaggagcgg
ctggagtttgaactgggcaccatcctgaagatgggctttcccggctacttcctcatcgtg
ggtgacttcatccagtgggccaagaagaacggctgcccggtgggccccgggcgcggctcg
ggtgcgggctcgctcgtggcctacgcgctcaagatcacggatctggatccgctgcaatac
aacctgctgttcgagcgcttcctgaaccccgaacgggtgtccatgcccgacttcgacatc
gatttttgccaggccaaccgcgaccgggtgatcgactatgtgaaggacaagtacggcaag
gaggccgtgagccagatcgccaccttcggcacgatggcggccaaggctgccatccgcgac
gtggggcgggtgatggacatgagctacacgttctgtgacggtatctcgaagctggtgccc
ggcaaacccggccagacctatacgctggcctacccgccagagcccaagaaggagggggac
aagaacaactacgccctggagttggaacccatcctgtacgagcgcgtgcgcaaggaggaa
gacgtgcgcaccatcatcgagatggcgcaaaaactcgaagggatgacgcgcaatattggc
atgcacgccggcggcgtgctgatcgcgccgggcaagctgaccgatttctgcccgctgtac
cagcagccaggcagcgaatcggcggtgagccagtacgacaaggacgacgtggaggccatc
ggcctggtgaaattcgacttcctgggcttggcgacgctgaccatcctggaaatcgcgcgt
gagttcatcatgcagcgccacaaagggcaggaaaacttcgcgttcgagaacattcccctg
gacgatgctgcgacctacaaactgttctcggacggcaagacagaagccgtgttccagttt
gaaagccggggcatgcaaggcatgctcaaggaagcgcgcccaagcaggctggaagacctg
atcgccttgaatgccctgtaccggcccggccccatggacctgattcccagcttcgtgaac
cgcaagcacggcaaggaggtggtggagtacccgcatccgctggtggagcccgtgctggcc
gagacctacggcatcatggtctaccaggagcaggtgatgcagacggcgcaggtgctgggt
gggtactcgctcggcggcgccgacatgctgcgccgcgccatgggcaagaaaaaggccgag
gaaatggccgagcaccgtgccattttccgcaagggtgcagccgaaaagggtatcagtcag
gacaaggccgacgaggtcttcgacctgatggaaaagtttgcgggttacggcttcaacaag
tcgcacgccgccgcctattcgctgctggcctaccacaccgggtggctcaaggtgcactac
acggcggagttttactgcgccaatatgaccgtggaaatggacgacaccgacaagctcaag
gtgctctatgaagacgcggtcaaacatttcggcatgaccttcgagccgccggacatcaac
cgcggcaattaccgcttcgagccggtgacggacaaggtcatccgctatggcctgggcgcc
gtcaagggcacgggacagcaggcgatcgaggccatcatcgccgcccgcgaagggcagggc
gtgggcccacagggcgcaacccgggggcctttcaagagcttgtttgacttttgcgtacgc
gtggaccgcacgcgcgtcaacaagcgcacggtggaggcgctcatcaaggcgggcgccttc
gatgccctgcagctcaaccgtgccgcgctcgtggcatccctcgatcgggcgttcgagttt
gccaatgcgcagatcgccaacgccaaccaaggcgggctgttcgacatgatgggcgatgac
gccatcggctccagcacgcaggagcctgatctggtggatgtgatgccctggggcatcaag
gaacggctgatgcaggagaagaccgcggtgggcttctacctctcgggccacttgttcgat
gaagtgcaccaggaagtgcgccgcttcgtgcgcaccgctatcgacgaactggtagacagc
cgcgagacgcaggtggtcgccggcatcgtgagcgactaccgcgtcatcaacgggcagcgc
ggcaggctggcgttgttcaagctggacgacaagtcgggcgtcatcgaggcttccgccgac
gaagggctgatcaacgcgaacgccggcctgctcaaggacgatgaattcgtagtggtgagt
ggtcggctgcagttggaccacttcagcggaggcctgcgtatgaaggtgcagcaggtctgg
gatttggcgggtgcgcgggcacgctatgggcgctatctgcaggtgtgcctggggcagcag
ttgccagacatcggggcgctggtgcgtgactatcctccgcaacgggaggagacagaacac
ggcgaggtgcttgcccatggcctgcgcgtgcgcatgcagttgcgctgcacagcggcggcc
ggcgcggccacggccgaggtgcagttgggagaggccagccggttctttcccagcgatgcc
gcgctggccgcgtggagcgctcaggcgggcagcggtgctgtgaatgtggtctatgagtag
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integrated database retrieval system
