Diaphorobacter sp. MNS-0: K2L43_14740
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Entry
K2L43_14740 CDS
T10618
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dim Diaphorobacter sp. MNS-0
Pathway
dim03410
Base excision repair
dim03430
Mismatch repair
dim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K2L43_14740 (recJ)
03430 Mismatch repair
K2L43_14740 (recJ)
03440 Homologous recombination
K2L43_14740 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dim03400
]
K2L43_14740 (recJ)
DNA repair and recombination proteins [BR:
dim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K2L43_14740 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K2L43_14740 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K2L43_14740 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QYY24926
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All DBs
Position
3084217..3085941
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AA seq
574 aa
AA seq
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MKIVARDIPPRVVWALEQAGVHPLLARLYAARGIRAKEELDDALARLLPPDTLMGVRQAA
ALLADAISQDRRLLIVADYDCDGATACAVGVRGLRLLGARHVQYLVPDRVVDGYGLTASI
AQRVHERGADVLITVDNGIASIEGVARAKALGLTVLITDHHLPGPELPAADAIVNPNQPG
CGFESKSIAGVGVMFYVLMALRAELRARGVFDKATQPKLEPLLPLVALGTVADVVRLDNN
NRRLVAQGLKRIRAGQMQAGIQALFDAAGRKAPVATTFDFGFALGPRINAAGRLADMTLG
IECLLTDDPARAADLARQLDAINRERRELEGGMREQALLLAESLFDEGEEPPPAISVFDP
DFHEGVVGIVASRLKDKLHRPTFVFAASSAPGKEHELKGSGRSIPGFHLRDALDLVAKRH
PGVILKFGGHAMAAGCTVAEEHFDLFEQAFAQVAQEWLDAATLTRRLETDGPLAPEYCRA
ELVDTLHREVWGQGFAPPTFSEEVQVLSQRLVGEARNHLSIKLLHQGQPVDAIWFGHTDP
LPERALLAFRLDVNEWRGERRVQFLVEGLESPAM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtagccagagacatcccaccgcgcgtggtctgggcgctggagcaggccggc
gtgcacccgctgctggcacgcctgtacgcggcgcgcggcatccgcgccaaggaggagctg
gacgacgccctcgcccgcctgctgccgccggacaccctcatgggcgtgcggcaggccgcg
gcgctgctggccgatgccatcagccaggaccggcgcctgctcatcgtcgccgactacgac
tgcgacggcgccactgcgtgcgcagtgggggtgcgcggcctgcgcctgctgggcgcacgc
catgttcagtatttggtgcccgaccgcgtggtggacggctacggcctcaccgcctccatc
gcgcagcgcgtgcacgagcgcggcgccgacgtgctcatcaccgtggacaacggcatcgcc
agcatcgagggcgtggcgcgcgccaaggcgctggggctgacggtgctcatcaccgaccac
cacctgcccggccccgaactgcccgcggccgacgccatcgtcaaccccaaccagcccggc
tgcggcttcgagagcaagtccatcgccggcgtgggcgtgatgttctatgtactgatggcg
ctgcgcgccgagctgcgcgcgcgcggcgtattcgacaaggccacgcaacccaagctggag
ccgctgctgccgctggtggccctgggcaccgtggccgatgtggtgcgcctggacaacaac
aaccgccgcctggtcgcgcagggcttgaagcgcatccgcgccggccagatgcaggccggc
atccaggccctgttcgacgccgccgggcgcaaggcccccgtcgccaccaccttcgacttc
ggctttgcccttgggccccgcatcaatgccgcggggcgcctggccgacatgacgctgggc
atcgaatgcctgctgaccgacgacccggcacgcgccgccgacctggcccggcaactggat
gccatcaaccgcgagcggcgcgaactagagggcggcatgcgcgagcaggccctgctgctg
gcggagagcctgttcgacgaaggcgaggagccgccgcccgccatcagcgtgttcgacccg
gactttcacgagggcgtggtgggcatcgtggcctcgcgcctcaaggacaagctgcaccgc
cccaccttcgtgttcgctgccagcagcgcgccgggcaaggagcatgagctgaagggttcg
gggcggtccatccccggctttcatctgcgcgacgcgctggacctggtggccaagcgccac
cccggcgtgatcctgaagttcggcggccacgccatggcggccggctgcaccgtggccgag
gagcatttcgacctcttcgagcaggccttcgcccaggtcgcacaggaatggctggatgcc
gcgacgctcacgcgccggctggaaaccgacggcccgctggccccggaatactgtcgtgcg
gaactggtggacacgctgcaccgggaggtctggggccagggctttgcgccgcctaccttc
agcgaggaagtgcaggtgctgagccagcgcctggtgggcgaggcgcgcaaccacctgtct
atcaagctgctgcaccagggccagcccgtggacgccatctggttcggccacaccgacccg
ctgcccgaacgggcgttgctggccttccggctggacgtgaacgagtggcggggcgagcgg
cgggtgcagtttctggtggagggactggagtcgcctgcaatgtga
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