Diaphorobacter sp. MNS-0: K2L43_15950
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Entry
K2L43_15950 CDS
T10618
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dim Diaphorobacter sp. MNS-0
Brite
KEGG Orthology (KO) [BR:
dim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dim03016
]
K2L43_15950
Enzymes [BR:
dim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
K2L43_15950
Transfer RNA biogenesis [BR:
dim03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K2L43_15950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QYY25147
LinkDB
All DBs
Position
3351216..3353387
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AA seq
723 aa
AA seq
DB search
MHALFDEAGKFLAGRILSEADSSAQIELDSGKRVKVKAANILLKFDKPAPAELLAQAREI
AAGVELPLAWEFAPEEEFGFAELARDYFSAQAPVTEQAGMLVALFEAPHYFRRAGKGRFR
KASAEVLQQALAAIEKKKQIQAQIDAWAAELVAGTCPQPVREQLYKILFRPDKNAPEYKA
VVEASRSAQKAPLDLLQAAGAIDSSYQFHWKRFLFDNFPKGTGFPPLAAPQPPADLPLAD
VQAYSIDDSATTEIDDALSVQGLGTGTVTLGIHIAAPGLAIQPGGDLDKLGRTRLSTVYM
PGYKITMLPGDVVQIYTLDEGRANPAVSLYVTIDEATLAITATETRLERVPVTVNLRHDQ
LDHIVTEEWLADPTIQHENTPQALLDLREQLSFLHRLAKSLKAQREVVRGKPETFNRPDY
TFRLSAARPPEGANAPAGGSAASEAASVGAHKPRNDGAEPDGSEQVHITTRKRGAPLDLI
VAEAAIVANSTWGNMLAEHGVPGIYRSQASLAPGVKVRMSTKALPHAGIGVKSYAWATSP
LRRYVDLVNQWQIIACARHGKTAALAAPFKPKDAELFSIISSFDAAYSAYNGYQAGMERF
WTLKYLQQNQITELDATVFKEGPNGSFLVRADTLPLVLPVLGAQQLPRGARVRVKLGEID
EITLDVAGTLVARLDDPLDASDDGPVDEDEGDEEAVAGPIAIAVDVNEAEGEGAGGTADN
RAP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcactgttcgacgaagccggcaagttcctggccggccgcatcctctccgaagcc
gacagctcggcacagattgagctcgactcgggtaaacgcgtcaaggtcaaggccgccaac
atcctgttgaagttcgacaagcccgccccggccgagctgctggcgcaggcgcgcgagatc
gccgccggcgtggagcttccgctggcctgggagttcgcgcccgaggaggagttcggcttc
gccgagttggcgcgcgactatttttctgcccaggcgccagtgaccgagcaagccggcatg
ctggtggcgctgttcgaggcgccgcactactttcgccgcgcgggcaaggggcgttttcgc
aaggcgtcggccgaggtgctgcagcaggccctcgccgccatcgagaagaagaagcagatc
caggcgcagatcgacgcctgggccgccgaactcgtcgccggcacctgcccgcagcccgtg
cgcgagcagctctacaagatcctgttccgccccgacaagaacgcgcccgagtacaaggcc
gtggtcgaggccagccgcagcgcgcagaaggctccgctggacctgttgcaggccgcaggt
gcgatcgactccagctaccagttccactggaagcgcttcttgttcgacaacttccccaag
ggcacgggctttcccccgctggcggcaccccagccgccggccgacctgccgctggcggat
gtgcaggcctattccatcgacgattcggccaccaccgagatcgacgacgccctctcggtg
cagggcctgggcaccggcaccgtgacgctgggcatccacattgccgcgccgggcctggcg
atccaacccgggggcgacctggacaagctggggcgcacgcgcctgtccaccgtctacatg
ccgggctacaagatcaccatgctgccgggcgacgtggtgcagatctacacgctggacgag
ggccgcgccaacccggccgtgtcgctgtatgtgacgatcgacgaggccacgctggccatc
accgccaccgagacgcgcctggagcgcgtgcccgtgacggtgaacctgcgccacgaccag
ctcgaccacatcgtgacggaagagtggttggccgacccaaccattcaacatgaaaacacg
ccacaggccttgctggatctgcgcgagcagctctcctttttgcaccgcctggcgaaaagc
ctgaaggcccagcgcgaggtggtgcgcggcaagcccgagaccttcaaccggccggactac
accttccgcctgagcgccgcccggccgcccgaaggcgcgaacgcccccgcggggggcagc
gcagccagcgaagcggcaagcgtgggggcccacaagccccgcaacgacggcgccgagccc
gatggcagcgaacaggtgcacatcaccacccgcaagcgcggcgcgccgctggacctgatc
gtggccgaggccgccatcgtcgccaacagcacctggggcaacatgctggccgagcacggc
gtgcccggcatctaccgcagccaggcgagcctggcgcccggtgtgaaggtgcgcatgtcc
accaaggcgctgccgcacgccggcatcggcgtgaagagctacgcctgggccacctcgccg
ctgcgccgctacgtggacctggtgaaccagtggcagatcattgcctgcgcgcgccacggc
aagaccgctgcactggccgcaccgttcaagcccaaggacgcggagctgttctccatcatc
agcagcttcgatgccgcctacagcgcctacaacggctaccaggccggcatggagcgcttc
tggacgctcaagtacctgcagcagaaccagatcaccgagctggacgccaccgtgttcaag
gaagggccgaacggcagcttcctggtgcgcgccgacaccctgccactggtgctgcccgtg
ctgggcgcgcagcagctgccgcgcggcgcacgcgtgcgcgtcaagctcggcgagatcgac
gagatcacgctggacgtggcgggcaccctggtggcgcgcctggacgacccgctggatgcc
agcgacgacggcccggtggacgaggacgagggcgacgaggaggccgtggccggcccgatc
gccatcgcggtcgatgtcaacgaggccgagggcgagggcgccggcggcaccgctgataat
cgggcgccgtga
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