Diaphorobacter sp. MNS-0: K2L43_17325
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Entry
K2L43_17325 CDS
T10618
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dim Diaphorobacter sp. MNS-0
Pathway
dim03030
DNA replication
dim03430
Mismatch repair
dim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K2L43_17325 (holA)
03430 Mismatch repair
K2L43_17325 (holA)
03440 Homologous recombination
K2L43_17325 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dim03032
]
K2L43_17325 (holA)
03400 DNA repair and recombination proteins [BR:
dim03400
]
K2L43_17325 (holA)
Enzymes [BR:
dim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K2L43_17325 (holA)
DNA replication proteins [BR:
dim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K2L43_17325 (holA)
DNA repair and recombination proteins [BR:
dim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K2L43_17325 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
QYY25390
LinkDB
All DBs
Position
complement(3657389..3658435)
Genome browser
AA seq
348 aa
AA seq
DB search
MQIALNQLGAQLHKGLRPLYTLHGDEALLQQEALDAIRAAARAQGYTERSSFTVAGAHFD
WSGVLAAGGSLSLFADKQIVEIRIPSGKPGKDGAAALQQMAAAAPGNDSTLTVVVLPRLD
KATRTGAWFAALEAHGATVQIDPVERAQLPGWIAQRLAAQGQRVVAGEEGQRTLQFFADR
VEGNLLAAHQEIQKLALLHPEGELTWAQVEAAVLNVARYDVFKLSEAVLSGQVARVQRML
DGLQAEGEAEVLVHWALAEDIRALKRVKDAMNAGKPLPMALRENRVWGAKERLFERLLPQ
ASDAALARLLQSAHTVDGIVKGLKAPDWPQDGWQALSRLALQMCKLAR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcgctttgaaccagctcggtgcgcagctgcacaaaggcctgcgcccgctctac
acgctgcacggcgacgaggcgctgttgcagcaggaggcgctggacgccatccgcgccgcg
gcacgtgcgcagggctataccgagcgcagcagcttcaccgtggccggcgcgcatttcgac
tggagcggcgtgctggccgcgggcgggtcgttgagcctgttcgccgacaagcagatcgtg
gagatccgcatcccctcgggcaagcccggcaaggacggcgccgccgcgctgcagcagatg
gctgccgccgcgccgggcaacgacagcacgctcaccgtggtggtgctgccgcgcctggac
aaggccacgcgcacgggcgcgtggttcgcggcactcgaagcgcacggcgccacggtgcag
atcgaccccgtggagcgcgcgcagctgcccggctggatcgcccagcgcctggccgcgcaa
ggccagcgcgtggtcgcgggcgaagaggggcagcgcacgctgcagttcttcgccgaccgg
gtggagggcaacctgctggccgcgcaccaggagatccagaagctcgcgctgctgcacccc
gagggggaactcacctgggcgcaggtcgaagcggccgtgctcaacgtggcgcgctacgac
gtgttcaagctgtccgaggcggtgctctccggccaggtggcgcgcgtgcagcgcatgctg
gacggcctgcaggccgagggcgaggccgaggtgctggtgcactgggcgctggccgaggac
atccgcgccctcaagcgcgtgaaagacgccatgaacgccggcaagcccctgcccatggcc
ctgcgcgagaaccgcgtctggggcgcgaaggagcggttgttcgagcgcctgctgccccag
gccagcgacgccgccctggcgcggctgctgcagtccgcccacacggtggacggcatcgtc
aagggcctgaaggcgcccgactggccacaggacggctggcaggccctctcgcggctggcg
ctgcagatgtgcaagctggcgcgctga
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