Desulfurispirillum indicum: Selin_0081
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Entry
Selin_0081 CDS
T01383
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
din
Desulfurispirillum indicum
Pathway
din03420
Nucleotide excision repair
din03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
din00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Selin_0081
03430 Mismatch repair
Selin_0081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
din03400
]
Selin_0081
Enzymes [BR:
din01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Selin_0081
DNA repair and recombination proteins [BR:
din03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Selin_0081
MMR (mismatch excision repair)
Other MMR factors
Selin_0081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
RIF2_lid
DUF6866_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADU64840
UniProt:
E6W4W2
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All DBs
Position
complement(84641..86572)
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AA seq
643 aa
AA seq
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MPHTQDISQAIFSQLNTQQGAAVAHVDGPALILAGAGSGKTRVLTARIMNLLQQGVAPWN
ILAVTFTNKAAGEMRQRIRSRLGPVASDIWIGTFHSIALRILRIECHHIGYESDFVIYDP
ADGLKVVTKVLKRLNISAQTMPAKKALGIISSLKNSGYRPDDLESASTLDTTVIAPVFRE
YQKLMLSFNAMDFDDLLLNLKEILYHSSDVLQKYQQKFRYIHVDEYQDTNQVQFEILHLL
AGQHRNLFAVGDDDQSIYRFRGATIENILNFEQHYPNTAIFKLEQNYRSPQSILDCANSI
ISRNPRRHPKQLFSDLGPGEKIGLKVLPSADDEASFIVGEIQQLLSDGFAPSDIAVLYRT
NAQSRLFEALLLRRGIPYRVVGSFEFWKRKEIQDVLAYVSLIANPRDIQAFERVVNYPLR
GIGAASVEKIVSLAVDSGRPVLEAAALMAADLRGKARQSIENFLEFLASFQGGQDYLISD
MIEEIVRKAGIDKDIRNREDEHQAQSRLENIGELISAATAFEKERPAEQITLSHFLEEIN
LGIETRQNTQEGVSLLTIHSAKGLEFPVVFLSGLENTLFPSPMSMGNQFAQEEERRLMYV
AVTRCQEKLFLTRAQSRTMFGKTTFCGESMFLRDIPQELLHKL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgccccatacccaggacatttcacaagccattttttcccaactcaatacccagcagggc
gcagccgtggcccacgtggacgggcctgccctgatcctggccggagctggcagcggcaag
acccgtgtcctcaccgccagaatcatgaatctccttcagcagggagtcgcaccctggaat
atcctggcggtcaccttcaccaacaaggccgctggagaaatgcgccagcggattcgctcc
cggctgggccccgtggccagcgacatctggatcggaaccttccacagcatcgccttgcgc
atcctgcgtattgagtgtcaccatatcgggtacgaaagcgattttgtcatctacgatcct
gccgacggcctcaaggtggtcaccaaggttctcaagcgcctcaacatcagcgcgcagacc
atgccggccaaaaaggctcttggtatcataagctcccttaaaaacagcggttatcgccca
gacgacctggagagcgcttcgaccctcgacaccactgtgatcgccccggtcttccgcgaa
tatcagaagctgatgctcagcttcaacgccatggatttcgatgatctgctgctgaacctc
aaggagatcctgtaccactcttccgatgtcctgcagaagtaccagcagaagtttcgctac
atccacgtggatgagtaccaggacaccaaccaggttcagtttgaaatcctgcacctgctg
gccggacagcaccgcaatctttttgccgtgggcgatgacgatcagtccatctatcgcttt
cgtggtgccaccatcgagaatatcctcaacttcgaacagcactatcccaataccgccatc
ttcaagctggagcagaattaccggtctccccagagtattctcgactgcgccaacagtatc
atcagccgtaacccgcgccgtcaccccaagcaactcttctccgacctgggacccggcgag
aaaatcggtctcaaggtgttacccagcgccgacgacgaagccagcttcatcgtcggtgaa
atccagcagcttctcagcgacgggttcgcccccagtgacattgctgtgctctaccgcacc
aacgcccagagccgcctctttgaagccctgctgctgcgccggggaatcccctaccgcgtg
gtgggctccttcgagttctggaaacgtaaagaaattcaggacgtacttgcctatgtcagc
ctgatcgccaaccccagggatattcaggcctttgaacgcgtcgtcaactaccccctgcgg
ggtattggtgccgcgtcagtggagaaaatcgtcagcctggccgtggacagcggtcgcccc
gtgctggaagctgccgccctcatggccgctgacctgcggggtaaggcccgccagagcatc
gagaatttcctggagtttcttgcctccttccagggtggccaggactacctcatcagcgac
atgattgaggaaatcgtgcgcaaggcgggaatcgacaaggatatccgcaatcgcgaagat
gagcaccaggcccagtcgcgcctggagaacatcggcgaactgatcagcgccgccaccgcc
ttcgaaaaggagcgccctgcggagcagatcaccctgagccacttccttgaggagatcaat
ctgggcattgaaacccgccagaacacccaggagggcgtcagcctgctgactattcactcc
gccaagggccttgagtttcccgttgtcttcctcagcgggctggaaaacaccctttttcct
tcgcccatgagcatggggaatcagtttgcccaggaagaagagcgccgcctgatgtacgtg
gccgttactcgctgccaggaaaagctctttctcacccgcgcccaaagccgaaccatgttc
ggcaaaaccaccttctgcggagaaagcatgttcctgcgggatattccccaggaactgctg
cataagctatga
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