Desulfurispirillum indicum: Selin_0087
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Entry
Selin_0087 CDS
T01383
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
din
Desulfurispirillum indicum
Pathway
din00550
Peptidoglycan biosynthesis
din01100
Metabolic pathways
din01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
din00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Selin_0087
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Selin_0087
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
din01011
]
Selin_0087
Enzymes [BR:
din01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Selin_0087
Peptidoglycan biosynthesis and degradation proteins [BR:
din01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Selin_0087
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF4714
Motif
Other DBs
NCBI-ProteinID:
ADU64846
UniProt:
E6W4W8
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All DBs
Position
90537..92342
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AA seq
601 aa
AA seq
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MVVVHEERNYQPFFQGRLLVLLSLIILGFVVVGLRLWYIQVLQHESLSSRAESNRIRTYE
TKAHRGKIFDRNNILLVENVPSYNLVVIKENVDDLEKLVEFLIDRFHIDERDFRDRYRAI
NRFRPLTVKRDISFEEVCYVEARHYEYPGLRVETVPKRHYIKGKMAANVFGYLGEISESE
LRRSEFSDYSVGDLIGKSGVEVAYERFLRGTSGRVTYEVDAVNRPIRTIDEVTPVSGTDI
RLALDYRLQKHMDALFKHYAGAAVVMDVRTGHILAMGSYPSFDPNLFATGISRADWQSLI
SNKHHPLENKATRSIFPPGSYFKMITALAGLEMGVIDEKTVTNFPGYYEYGNRRYRDWNR
GGHGATDVYKSLEESVDSFYYHYGLEIGIDNMAKYGSMFGLGRRTGIDIPGEKPGILPTR
AWKLENRGEVWYPGDTIPASIGQGYVTLTPLQLAVMTAAIANGGYVLTPRLVSHVGEEEQ
LIVPGQQADISPRNLSIIQEGMRRVIYGERGTGRHLRHPRVTMAGKSATAQVIGLAPDEE
YDEQNIYVGHRDHAWFGGYAPLDNPKIAVLVFVQNGGSGARTAGPLFRDLVVYALEELKV
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggtagtggttcacgaagagcgtaattaccagcctttttttcaggggcgtctgctggtg
ttgctgagcctgatcattcttggttttgtcgttgttggcctgcgcctgtggtatattcag
gtgctgcagcatgaatcgctctccagtcgcgccgagagcaaccgtatccgtacctatgaa
accaaggcccaccgcggcaagatatttgatcgcaacaacattctgctggtggagaatgtc
cccagttataaccttgtggtcatcaaggagaatgtggatgacctggagaaactggtggag
tttctcattgaccgttttcatattgacgaacgggatttccgcgatcgctaccgggccatc
aaccgctttcgtcctttgacagtgaagcgtgatatcagctttgaagaggtatgctatgtg
gaggcgcgccattacgagtatcctggtctgcgggtggagactgttcccaagcgccactac
atcaagggaaagatggcggccaatgtttttggctacctgggtgagatcagcgaaagcgag
ttgcgccgctcggagttcagtgattattccgtgggagacctgattggaaaatccggcgtg
gaagtggcctacgagcgttttctgcggggaacctctggtcgagtgacctatgaggtcgat
gcggtgaaccgccccatacgcaccattgatgaagtgaccccggtttccggaacggatatt
cgcctggccctggactaccggctccaaaaacacatggacgccctctttaagcattacgcc
ggtgccgcggttgtcatggacgtgcgcaccggccatattctggccatgggcagctacccc
tccttcgatcccaatctctttgccacgggcatcagccgggctgactggcagagcctgatt
tccaataagcaccaccccctggagaacaaggccacccgcagtatttttcctcccgggagc
tacttcaagatgataacggctctggcgggcctggagatgggggttattgatgaaaagacg
gtcaccaactttcctggttactatgagtatggcaaccgacgctaccgcgactggaaccgt
ggagggcatggtgcaactgatgtgtacaagtctctggaagagagtgtggattcgttttac
taccattacgggctggagatcggcatcgacaacatggccaagtatggcagcatgtttggc
cttggcaggcgtaccggcattgatatccctggcgaaaagccggggattctccccactcgc
gcctggaaactggaaaaccgtggtgaagtatggtatcccggagataccattcccgccagt
atcggtcagggatatgtgacactgacgcccctgcagctggccgttatgaccgcagccatt
gccaacggtggctatgtactgacgcctcgccttgtttcccatgtcggcgaggaggagcag
ctgattgtacccggccagcaggcagatatctcaccccgcaacctttccatcatccaggag
ggcatgcggcgggttatctatggcgaacgaggcacagggcgccatctgcgtcacccacgc
gttaccatggccggcaaaagtgcaactgcccaggttatcggcctggcccccgatgaggag
tacgatgagcagaatatctacgtgggacaccgggatcacgcctggttcggtggctatgct
cccctcgacaaccccaaaatagcggtgctggtctttgtgcagaacggaggatcaggagcc
cgcaccgccggtccgcttttccgtgacctggtggtctacgcccttgaggagttgaaagtt
ccctga
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