Desulfurispirillum indicum: Selin_0359
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Entry
Selin_0359 CDS
T01383
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
din
Desulfurispirillum indicum
Pathway
din03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
din00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Selin_0359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
din03021
]
Selin_0359
03400 DNA repair and recombination proteins [BR:
din03400
]
Selin_0359
Enzymes [BR:
din01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Selin_0359
Transcription machinery [BR:
din03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Selin_0359
DNA repair and recombination proteins [BR:
din03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Selin_0359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RAD51D_N
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
ADU65115
UniProt:
E6W737
LinkDB
All DBs
Position
385516..386580
Genome browser
AA seq
354 aa
AA seq
DB search
MMMNWNEVIRPRALVCDTKTATDSYGKFIAEPLERGFGITLGNALRRVLLSSLEGAAVTA
IRIDNVLHEFSTVSGVVEDVTDIILNVKQLRFKLLSPGEKVLTLKASSVGPVTAASLECP
PDVKVLNSDCVIATLGREDAELNMELRVDIGRAYRLAEENKKADDVIDMIPVDSLFNPVV
KVNYTVEQARVVQDTNFDKLILEVWTDGSVKPEDAVAFAAKIIKDQLAIFINFEDVEEPV
ALESVEDGSEELFALLSKSVEELELSVRSYNCLNNIDIRTIADLVARSENELLKTKNFGK
KSLLEIKEILKEMNLTLGMDLDALGYQPVVAAESGDEQDSDDETVEETEESTRG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaactggaatgaagtcatacgcccaagagccttggtatgtgataccaaaact
gcgacggattcatacgggaagtttattgcggaaccccttgagcgcggtttcggaataact
ctaggcaacgcgctgcgccgtgtactgctctccagccttgaaggggcggcggtaacggcc
attcgcattgataacgtcctgcatgagttttctacggtttctggtgtggtggaagatgtg
acggatatcatcctgaacgtgaaacagctgcgcttcaaactgttgagtcccggcgaaaag
gtgctgaccctgaaggccagctctgttggccccgtcaccgcggcatcccttgagtgccca
cctgatgtgaaggtgctcaacagcgattgtgtgattgccaccctgggccgtgaagatgcg
gagctcaacatggagctgcgcgttgacatcggacgggcgtaccgtttggctgaagagaac
aagaaagcggacgatgtgattgacatgatcccggtggactccctgttcaatccggtggtc
aaggtgaattacacggtcgagcaggcgcgggttgttcaggacacaaacttcgataagctc
attctcgaggtgtggactgacggcagcgtgaagcctgaggatgcagtggcctttgccgcc
aagatcatcaaggatcagctggccatctttattaactttgaagatgtggaagagccggtg
gcactggaaagcgttgaagatggcagcgaggagctgtttgcgcttctgagcaaatccgtt
gaggagctggagctgagtgtccgatcctacaactgcctgaacaatatcgatatccgcacg
attgccgacctggtggcgcgctctgagaacgagctgctgaaaaccaagaatttcggcaaa
aagtcgttgctggaaatcaaggaaatcctcaaagagatgaacctgaccctgggaatggat
cttgatgccctgggttatcaaccggttgtcgccgctgagtctggtgatgagcaggacagt
gacgatgaaaccgtggaagaaaccgaagaaagtacacgaggttaa
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