Desulfurispirillum indicum: Selin_1070
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Entry
Selin_1070 CDS
T01383
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
din
Desulfurispirillum indicum
Pathway
din03030
DNA replication
din03430
Mismatch repair
din03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
din00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Selin_1070
03430 Mismatch repair
Selin_1070
03440 Homologous recombination
Selin_1070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
din03032
]
Selin_1070
03400 DNA repair and recombination proteins [BR:
din03400
]
Selin_1070
Enzymes [BR:
din01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Selin_1070
DNA replication proteins [BR:
din03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Selin_1070
DNA repair and recombination proteins [BR:
din03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Selin_1070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADU65805
UniProt:
E6W3L2
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All DBs
Position
1160605..1161225
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AA seq
206 aa
AA seq
DB search
MLHTIKQYFNRKGLRDPEYEFLFEPYTGEEAVSFDCETTGLDVHHDEIISIGAVRIRGNQ
ILTSEKLELFFNPQQEMRVESIKIHHLLTCDLVDGVPLEEGIRQFLNFIGNRPLVGYYLE
FDVAMVNRVLKPMLGITLPNRQIEVSGLYYDKKIAAIPQGNVDLRFDSIMHDLDLPPFAK
HDALGDAIMTAMMYVKLQHIKYLEKF
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgctccacacaataaagcagtatttcaaccgtaaggggttacgtgaccctgagtatgag
tttctctttgagccctacaccggtgaggaggcggtttcgtttgactgcgaaaccactgga
ctggatgttcaccatgatgaaatcatctccatcggcgcggtgagaattcgcggcaatcag
atcctcaccagcgaaaagctggagctctttttcaacccccagcaggaaatgcgcgtggag
agtatcaagattcaccatctgctgacctgcgatctggtggacggcgttccccttgaagaa
gggatcaggcaattcctgaactttatcggcaacagaccgctggtgggatactacctggaa
tttgatgtggccatggtcaatcgggttctgaagcccatgctggggattacgctgcccaat
cggcagattgaagtatcgggactttactacgacaagaaaattgccgctattccccaggga
aacgttgacctgcggttcgattccataatgcatgatcttgaccttcccccctttgccaaa
cacgatgcgctgggcgatgccatcatgaccgccatgatgtacgtgaaactgcagcacatc
aagtatcttgagaagttctga
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