Desulfurispirillum indicum: Selin_1193
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Entry
Selin_1193 CDS
T01383
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
din
Desulfurispirillum indicum
Pathway
din03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
din00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Selin_1193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
din03019
]
Selin_1193
03009 Ribosome biogenesis [BR:
din03009
]
Selin_1193
Enzymes [BR:
din01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Selin_1193
Messenger RNA biogenesis [BR:
din03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Selin_1193
Ribosome biogenesis [BR:
din03009
]
Prokaryotic type
rRNA helicases
Selin_1193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Flu_M1
Motif
Other DBs
NCBI-ProteinID:
ADU65928
UniProt:
E6W4F4
LinkDB
All DBs
Position
complement(1311795..1313261)
Genome browser
AA seq
488 aa
AA seq
DB search
MTASSPVDSFESLGLSAQTLQALREKGFEKPTSIQKACIPLVLHQHVDVVGQAQTGTGKT
AAFGLPIIETVKPERRQIQALILTPTRELALQVADEITSLCGSMKLDIATLYGGQSIGLQ
IQKLRRGVHIAVGTPGRIQDLIDRGNLDLSHLEYVVLDEADEMLNMGFIEDIENILQHTP
AEKRMLLFSATMPRPILNLAKRYMSTYEHVVAEQTQKTTSLTDQIYYEVREADKFEALCR
VIDITPDFYGVVFCRTKVDADEITRRLQHRKYVTEALHGDVSQNQREKILDAFRRKRLNI
LVATDVAARGIDVQNLTHVINFSLPQSPESYVHRVGRTGRAGKEGTAITFISPAEFRKLA
FIQKITQTTIRRQELPDVNTVIKLKKESIAGALENLIESGEYQQHGDFAQDILQKHSAQN
IVAALIQHFYRDELDPASYREIQRVVFEKDKLKPKAPFVKGRKSSGPKKPFKPANKRVKH
TGSAPRKK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcttcaccagtggattcctttgaatcccttggactctcagcacaaacactc
caggccctgcgcgaaaagggatttgaaaaaccaacaagcattcagaaggcctgcatcccc
ctggtgctccatcagcatgtggacgtggtgggccaggcacagaccggcaccggaaaaact
gccgcctttggtctgcccatcatcgaaacggtcaaaccggaacgccgccagatccaggcc
ctcatcctgacccccacccgggaactggccctgcaggtcgccgacgagatcacctctctg
tgcggttccatgaagcttgatattgcaaccctctatggcggacagtccattggcctgcag
attcagaaactgcgccggggcgttcacattgccgtgggcacccccggccgtatccaggat
ctgatcgaccggggcaaccttgacctgagccacctggagtatgtggtgctggacgaagct
gatgaaatgctcaacatgggcttcatcgaagatatcgaaaatatcctgcagcacaccccc
gccgaaaagcgcatgctgctcttctccgccaccatgccccgtcctatactcaatcttgcc
aaacgctacatgtccacctatgaacatgtggtagccgagcaaacccagaagaccacttca
ctgaccgaccagatctattacgaagttcgtgaagccgataaatttgaagccctgtgccgg
gtcatcgacatcacccccgatttctacggtgtggtgttctgccggaccaaggtggatgcc
gatgagatcacacgcaggctgcagcatcgaaaatatgtcaccgaagccctccacggcgat
gtctcccagaatcagcgggaaaagatcctggatgccttccgccgcaagcgtctcaatatt
ctggtggccacggatgtggcggctcgtggcattgatgtgcagaacctcacccacgtcatc
aacttctcactgccccagagccccgaaagctacgtccaccgcgtcggccgcacgggccgt
gccggcaaggaaggtaccgccatcacctttatcagtccggcggagttccgtaaactggcc
tttattcagaagattacccagacgaccatccgacgccaggaactgcccgatgtgaatacg
gttatcaagctgaaaaaagagagcatcgccggagcgcttgagaatctcatcgaaagcggc
gaataccagcagcacggcgactttgcccaggacatcctgcagaagcattccgcccagaat
atcgtggcggcgctgattcaacacttttatcgcgatgagcttgatccggcctcctaccgg
gaaatccagcgcgtcgtcttcgagaaggataaactgaagcccaaagcaccttttgtgaaa
ggccgaaaatccagcggaccaaaaaaaccattcaaacctgccaacaagcgtgtcaaacac
acgggttccgcgccgcgcaagaaataa
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