Desulfurispirillum indicum: Selin_1261
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Entry
Selin_1261 CDS
T01383
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
din
Desulfurispirillum indicum
Pathway
din03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
din00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Selin_1261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
din03019
]
Selin_1261
Enzymes [BR:
din01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Selin_1261
Messenger RNA biogenesis [BR:
din03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Selin_1261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
ADU65996
UniProt:
E6W520
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All DBs
Position
1392896..1394464
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AA seq
522 aa
AA seq
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MLRYILNKIRKLPLRKLKGQSSQSSSVAENTTDTTSPKPLYKSQRKKSAKTAPKPKETPN
TEPERVPRSGGKKRRASAEKTEQTVRPESTPWTPEVFQVDPQEGRVRFHDLNLPEELMHA
IYDLGFAYCTPIQEQVLPRAIEGKDAIGKAQTGTGKSAAFLMTIICRLLSRPQEKASIGR
PRALILAPTRELAMQISKDAHDLCRYTPLKIVTLFGGMDMNKQRQRLENEAVDIVVATPG
RLLDLKYQKCVFLGKVEILVIDEADRMLDMGFIPDVRQIVNSTMPKHLRQTLLFSATLSN
EVTRLASAWMTEPFMVEIEPEQVTVETVDQLVYITTREEKFTLLWNTINQANLTRVIVFA
NRRDETRHLSEKLTRYGVTNAILSGEVPQAKRIRTLENFREGKIAVLVATDVAGRGIHVD
SISHVINYNLPENPEDYVHRIGRTGRAGASGISVSFACENDSFYIPAIEDYIGKKLTCKY
PGDELLRPLPAPQKKEAAPQEASSGSKRSSRSRNRRKPRKSE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttgttacgctacatactgaacaaaatccgcaaactgcccctgcgaaaactcaaagggcag
tcatcacagagttcatcggtcgctgagaacacgacagacacgacatcgccaaagcccctg
tacaagtcccagcggaaaaagagtgccaaaacagctccaaagcccaaggaaacgccaaat
actgaaccggagcgcgtaccccgcagtggcggaaaaaagcgccgggcatctgccgaaaaa
accgagcagaccgtacgaccggaatcaacaccctggactcccgaagtctttcaggttgac
ccccaggaagggcgcgtccgttttcacgacctgaatctgccggaagagttgatgcatgcc
atttacgatcttggttttgcgtactgtacgccgatccaggaacaggtactgccccgggcc
atagagggcaaggatgccatagggaaagcccagacaggaaccggcaagagcgcggctttt
ctcatgaccatcatctgccggctgctgtcccgtccccaagaaaaagccagcattggacgt
ccacgagccctgattctcgctccgacccgtgagctggcaatgcagatatccaaggatgcc
catgacctgtgtcgttatacccccctgaagatcgtgacgctctttggtgggatggatatg
aacaaacagcgccaacgcctggaaaacgaagcggtggatattgtggtggctacccctggc
agactgctggatctgaagtatcagaagtgcgtgttcctggggaaagtcgagattctggtt
atcgatgaagctgaccgcatgctggatatgggatttattcccgatgtgcgccagatcgtc
aactccaccatgcccaagcacctgcgtcagacactgcttttctcggccacgctttccaat
gaagtcacccgtctggcatccgcctggatgaccgagcccttcatggtggagatcgagccg
gaacaggttacggtagaaaccgtcgatcagctcgtctatatcaccacccgtgaggaaaaa
ttcaccctgctgtggaacaccatcaatcaggcgaacctgacccgcgtcattgtcttcgcc
aaccgccgcgatgagacccgtcacctttcggaaaaactgacccgctacggtgtcaccaat
gcgatactttccggtgaagtgccccaggcaaagcgtattcgcaccctggagaacttccgc
gaaggcaagatcgccgtcctggtggccaccgacgtggccggtcgcggcatccacgtggac
agcatcagccacgtcatcaactacaatctgcccgaaaaccccgaagactacgtgcaccgt
atcggccgtaccggcagagccggagcctccggcatctcggtcagctttgcctgtgaaaac
gattccttttatatccctgccatcgaagactacatcgggaagaaactcacctgtaaatat
cctggggatgagctgctgcgaccgcttcccgctccacagaagaaggaggcggcaccacag
gaagcttcctcgggttccaagcgttcatcgcgctccagaaaccgacgtaaacccagaaaa
tcagagtga
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