Desulfurispirillum indicum: Selin_2218
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Entry
Selin_2218 CDS
T01383
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
din
Desulfurispirillum indicum
Brite
KEGG Orthology (KO) [BR:
din00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
din03032
]
Selin_2218
03400 DNA repair and recombination proteins [BR:
din03400
]
Selin_2218
Enzymes [BR:
din01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Selin_2218
DNA replication proteins [BR:
din03032
]
Prokaryotic type
DNA Topoisomerases
Selin_2218
DNA repair and recombination proteins [BR:
din03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Selin_2218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Zn_ribbon_InsA
Toprim_2
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
ADU66938
UniProt:
E6W3Q7
LinkDB
All DBs
Position
2448621..2450927
Genome browser
AA seq
768 aa
AA seq
DB search
MGKKKLVIVESPAKAKTINRYLGNNFTVKASVGHVRDLPKSTFGVDLENNFEPKYVTLRD
KKKVIDELKSAASRVDEVFLASDPDREGEAIAWHISEILQKENKGLAIKRVLFNEITKKA
IVQALEHPGEIVQPKVDAQQARRIIDRIVGYKISPFLWEKISRNLSAGRVQSVALRLVCE
REKEIDAFVTEEYWSVVTQFIKDEVPFQAKLFRIKEKKAQIKDGDTAHAIVDALKKGSFT
VGTVEKKQKRKRPMPPFTTSKLQQDASRKLRFSAKKTMMVAQSLYEGVNLGEYGQTGLIT
YMRTDSTRLSQDAIDMAREYIGKTFGPDYLPEKPRVYATGGKTQDAHEAIRPTTSLNPES
IKAHLTGDQYRLYKLVFDKFLASQMADALIDATAADIINGDYTLRATGSVVAFAGHLALY
QAVEESAKKEEDILPPLHQGDKLTSEDIQALQHFTQPPPRYTEATLVKTLEEKGIGRPST
YASILSTIEDRKYVEKEDRKFTPTERGKIVNELLVNHFPELFEYSFTANLEAKLDRIEEG
EENWKDTLGNFYEGFQRELEKAKESLKHVDKINIKSGVACPKCEAELVIKSGRNGEFLAC
IRYPECEFTSNFTKEEDGSITIVQRPAEEMTSIACDKCGKPMAIKMSRRGPFLACSGYPE
CKNPKSFRREEDGTIVVVEKKPAEPTDIACEKCGAPMVIRASRRGEFLACSAFPKCRNTK
NMERDEQGKAVIKEKKATAKEPGEKAAAPKAKAAAKKAPAKKSAAKKK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaagaaactcgtcattgtggaatcacctgccaaagcgaaaaccattaaccgc
tacctggggaataattttaccgtcaaagccagtgtggggcatgtccgcgaccttcccaag
tcgacttttggcgttgatctggaaaataactttgagcccaagtatgtgaccctgcgcgat
aagaagaaggtaatcgatgagctgaaaagcgctgccagcagggttgatgaagtctttctg
gcaagcgatcccgatcgcgagggagaggccatcgcctggcatatcagcgagattctgcag
aaggaaaacaagggacttgccatcaagcgggtgctcttcaacgaaataaccaagaaggcc
attgtgcaggcgttggaacatcccggcgaaatcgtccagcccaaagtggatgcccagcag
gcccggcggattatcgaccgtatcgtgggctacaagatcagccccttcctgtgggagaag
atctcgcgcaacctctccgccggcagagtgcagagcgtggccctgcgcctggtgtgtgaa
cgggagaaggagatcgacgcctttgtcaccgaggagtactggagtgttgtcacccagttc
atcaaggacgaggtgccctttcaggccaagctcttccgcatcaaggagaaaaaggcccag
atcaaagacggagacacggcccacgccatcgttgacgccctgaaaaaaggttcgttcacg
gttggcacggtggaaaagaagcaaaagcgcaagcgccccatgccgccttttaccaccagc
aagctgcagcaggatgcctcacgcaagctgcgtttttccgccaagaagaccatgatggtg
gcccagtcactctatgaaggggtcaaccttggtgagtacggccagacgggtctgatcacc
tatatgcgtaccgattccaccaggctctcccaggatgccattgacatggcccgcgaatat
atcggcaagaccttcggccccgattatctgccggaaaagccacgggtctacgccacgggc
ggcaagacccaggatgcccacgaggcgattcgccccaccacttccctgaaccccgaaagc
atcaaagcacacctgacgggggatcagtaccgcctctacaagcttgtttttgacaagttc
ctggcgtcgcagatggccgatgccctgattgacgccacggcggcggatatcatcaatggc
gactacaccctgcgcgccaccggaagcgtggtggcctttgccggtcacctggccctctat
caggcggtggaggagagtgccaaaaaagaagaggatattctgccgcccctgcatcagggc
gacaagctcaccagtgaagatatccaggccctgcagcacttcacgcagccaccgccccgc
tatacggaggcgacactggtgaagacccttgaggaaaaaggtatcggccgtcccagtacc
tatgcctccattctctccaccatcgaagatcgcaagtatgtggaaaaggaggaccggaag
tttacccccaccgagcgtggaaaaatcgtcaacgagcttctggtcaatcacttccccgaa
ctctttgagtacagctttaccgccaatctcgaagccaagctcgaccgcatcgaggaaggc
gaggagaactggaaagataccctggggaacttctacgaagggtttcagcgggagctggag
aaggccaaggagtcgctgaaacacgttgacaagatcaatatcaagtcgggggtagcctgc
ccgaaatgtgaagcggagctggtgatcaagagcggtcgcaacggtgaattcctggcgtgt
atccgctatccggagtgcgagttcacctccaacttcaccaaggaagaggatggctccatc
accattgtgcagcgtccggccgaagagatgaccagcatcgcctgcgacaagtgtgggaag
cccatggccatcaagatgtcacgacgtggccccttcctggcgtgcagcggttatccggaa
tgcaaaaaccctaaaagcttccgccgtgaagaggatggcaccattgtggtggtagagaag
aagccagctgagcccaccgatatcgcctgtgagaagtgcggcgcccccatggtgatccgc
gcctcccgccgcggcgagttcctggcctgctcagcgtttcccaagtgccgcaacaccaag
aatatggagcgcgatgaacagggtaaggcggtgatcaaggagaaaaaagccaccgccaag
gaacctggcgaaaaggcggcagcgcccaaggcaaaggcggctgccaaaaaggcacccgca
aaaaaatcagctgcgaaaaagaagtag
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