Desulfurispirillum indicum: Selin_2576
Help
Entry
Selin_2576 CDS
T01383
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
din
Desulfurispirillum indicum
Pathway
din03030
DNA replication
din03430
Mismatch repair
din03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
din00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Selin_2576
03430 Mismatch repair
Selin_2576
03440 Homologous recombination
Selin_2576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
din03032
]
Selin_2576
03400 DNA repair and recombination proteins [BR:
din03400
]
Selin_2576
Enzymes [BR:
din01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Selin_2576
DNA replication proteins [BR:
din03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Selin_2576
DNA repair and recombination proteins [BR:
din03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Selin_2576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
T2SSK
PHP_C
Motif
Other DBs
NCBI-ProteinID:
ADU67287
UniProt:
E6W6F2
LinkDB
All DBs
Position
complement(2877838..2881329)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSFVHLHLHTMYSLLDGAIKIPELVKKAKEYGMPAVAMTDHGNMFGAVDFYKQCTKAGIK
PILGCEVYVSPGSMREKRNAEGVYEGAYHLVLLAENMTGYRNLIYMVSQGYLEGFYYKPR
IDKELLRECSEGIIALSACLGGEVPNQLLAGDTEGARRSALEYLEIFGEGNFFLELQENG
MDDQRAVNRQLIALAEETGIPMVATNDCHYLNREDAKAHDILLCIQTQSNFDDEKRFRFD
SDQLYFKSPETMHKDFGHIKDAIANTVKIAERCNVQLEMGKVYLPKYDIPAEHTLESYIG
EVSRKGLLERFAQFDRLGLTYDRPAYEERLEIELDVINSMGFPGYFLIVADFIQWGKDQD
IPVGPGRGSAAGSLVAYALKITDIDPIPYNLLFERFLNPERVSMPDIDIDFCMNRRGEVI
DYVRKKYGDQNVCQIVTYASLQAKGVLRDVCRVMGLPYSDGDKLSKLVPNKLGITLDEAI
SMEPKLKEAAAAMPHGENLLKYSLALEGLFRQAGMHAAGIVITDEPIYTYAPLSRGPEGE
PVCQFDKDKAEDIGLVKFDFLGLKTLTVIDEACRFVQQTQKLPAKFDISAIAMDDQPTYD
LLCSGKSAGIFQLESGGMRSLLTKLKPSNFEDIVAVLALYRPGPLGSGMVDDFVDRKQGR
SEILYLFPELEPILKDTYGVIVYQEQVMQIARTIGGYSLGAADLLRRAMGKKKEEEMVKQ
KEIFLHGDGDKVPGAKAMGFDLKKAEQVFDLMAYFAGYGFNKSHSAAYALVAYQTAYLKA
HYPSELMAALLSCEMDNTDKVVQFINECKSMGLEVHPPHINLSGHSFTVDEDGRSIIFGL
TAIKNVGSKAVEAILQERQENGPFTSLYDFTERVDLRSVNKRVVENLIKCGAFDSVHANR
RQLIGALDHAFSLGQTIQKDREAGQISLFEMEAQDDSSDDLSHHEEYPDVEDWNTTTRVA
FEKECLGFFVSGHPLEPFQSVLEGYTTPIASVLEAQKKGRVRIAGVLSSLQPKTTKAGKK
MAIIVVEDQTAKLEIPIFPKTYEQFYSQLSVDSILIIEGKTEPKDDSVTIITESIYSVDE
ALGNCVSAVEFNINRLEFSTELLTELEALVKSFPGDRSFFVKIFTPQQYEAVIRTGVKVR
PDASMVRALGERFGHDVLRCHSA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtccatttgcatttgcacaccatgtactccctccttgacggagccatcaaa
attcccgagctggtaaagaaggccaaggaatacggcatgcccgcggtggccatgaccgac
cacggcaatatgtttggcgcggtggatttctataagcagtgtaccaaggctggtatcaag
ccgattctggggtgcgaggtctatgtttctcccggcagcatgcgcgagaagcgcaacgcc
gaaggggtctacgaaggggcctaccacctggtgctgctggccgaaaatatgacgggctat
cgcaatctcatctatatggtctcccagggttacctggagggcttctactataagccgcgt
atcgacaaggaactgctgcgggagtgttcggagggtattattgccctctcggcctgcctg
gggggcgaggtgcccaaccagctgctggccggggacacggagggcgcccgtcgcagtgcc
ctggagtacctggagatcttcggtgaaggcaacttcttcctggagctgcaggaaaacggc
atggatgaccagcgggccgtcaatcgtcagctgatcgcccttgcggaggagacgggcatc
cccatggtggccaccaacgactgccactacctcaaccgcgaagacgccaaggcccacgat
atcctgctgtgtatccagacccagagcaactttgacgatgaaaagcgtttccgctttgac
agcgaccagctctatttcaaatcccccgagaccatgcacaaggacttcggccatatcaag
gacgccattgccaatacggtgaaaatcgccgagcgctgcaatgtgcagctggagatgggc
aaggtctatctgcccaagtatgatattcccgccgagcataccctggagagctatattggc
gaagtctcccgcaagggcctgctggagcgctttgcccagtttgaccgcctggggctgacc
tacgatcgcccggcctatgaagagcgcctggaaattgaactggatgttatcaacagcatg
ggttttcccggctacttcctcatcgtggccgactttattcagtggggcaaggatcaggat
attcccgtggggccgggccggggttccgctgccggcagcctggtggcctacgccctcaag
atcaccgacatcgatcccatcccctataacctgctcttcgagcgctttctgaaccctgag
cgcgtctccatgcccgatatcgatatcgacttctgcatgaaccgccggggcgaagtcatc
gactatgtgcgcaaaaagtatggcgaccagaacgtctgccagattgtcacctacgcttcc
ctgcaggccaagggggtgttgcgggatgtgtgccgggtcatggggttgccctacagtgac
ggtgacaagctgtccaagctggtgccgaacaagctgggcattaccctggatgaggccatc
tccatggagcccaagctcaaggaggcggcagccgccatgccccacggggagaacctgctg
aagtactccctggccctggagggcctcttccgccaggcgggcatgcacgccgccgggatt
gtcatcaccgatgagccaatttacacctacgcgcccctctcccgtggccctgaaggcgag
ccggtctgccagttcgacaaggacaaggccgaagatatcgggctggtgaagtttgacttt
ctgggcctgaagaccctgacggtcattgacgaagcctgccgctttgtgcagcagacccag
aagctgcccgccaaatttgatatcagcgccattgccatggacgatcagcccacctatgac
ctgctgtgctccggcaagtcagccgggatattccagctggaatcggggggcatgcgcagc
ctgctgaccaaactcaagccttcaaacttcgaggatatcgtggccgtgctggccctctac
cgtcctggtcctttgggttcaggcatggtggatgacttcgtggatcgcaaacagggtcgt
tccgagattttatacctgtttcccgaactggagcccatccttaaagacacctacggagtt
atcgtctaccaggagcaggtcatgcagattgcccgcaccatcggcggctactccctggga
gctgccgacctgctgcgccgcgccatgggcaagaagaaggaagaggagatggtcaagcag
aaggaaatcttcctccacggcgatggtgacaaggttcccggtgccaaggccatgggcttt
gacctgaagaaggccgagcaggtctttgatttgatggcttattttgccggctacggcttc
aacaagtctcactcggcggcctacgccctggtggcctaccagacagcttacctgaaggcc
cactacccatcagagctgatggcggccctgctctcctgcgagatggataacactgacaag
gtggtgcagttcatcaacgagtgcaagagcatggggcttgaggtgcacccaccccatatc
aacctctccggccactccttcaccgtggacgaagatggccgcagcatcatcttcggcctg
accgccatcaagaacgttggctccaaagcggtggaggctattctgcaggagcgccaggag
aatgggcccttcacctccctctatgacttcaccgagcgggtggatctgcgcagtgtgaac
aaaagggtggtggaaaacctcatcaagtgtggtgccttcgattccgtacacgccaatcgc
cgtcagctgatcggcgcgctggaccacgccttctccctggggcagaccatccagaaagat
cgcgaggctgggcagatctcgctctttgagatggaggcccaggatgacagttccgacgac
ctgagccaccatgaggagtatcccgatgtggaagactggaataccaccacgcgggttgcc
tttgaaaaggagtgcctgggcttttttgtcagcggacatccccttgagcccttccagtcg
gttctggaaggctacaccactcccattgcgtcggtgctggaagcccagaaaaagggcagg
gtgcgcattgcgggggtcctctcttccctgcagcccaaaaccaccaaggcagggaaaaaa
atggctatcatcgtggtggaggatcagacggcaaagctcgaaataccaatatttccaaaa
acttatgaacagttttattcacaactcagtgtcgatagtattctgatcattgaagggaaa
accgagccaaaggatgacagtgtaaccataattacagaaagcatttatagtgtagacgag
gcgctgggcaattgtgtaagtgccgttgaattcaacatcaaccgcctggagttttccaca
gagttactcacagagctggaagctctggtaaaaagcttccctggggatagatccttcttt
gttaaaatattcaccccccaacagtacgaagccgttatccgcaccggcgtgaaggtccgc
cccgatgccagcatggtgcgtgccctcggggagcgtttcggccacgatgtcctgcgctgt
catagcgcgtaa
DBGET
integrated database retrieval system
