Desemzia incerta: QNK01_05385
Help
Entry
QNK01_05385 CDS
T09072
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dinc
Desemzia incerta
Pathway
dinc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dinc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNK01_05385 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dinc03021
]
QNK01_05385 (rho)
03019 Messenger RNA biogenesis [BR:
dinc03019
]
QNK01_05385 (rho)
Transcription machinery [BR:
dinc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QNK01_05385 (rho)
Messenger RNA biogenesis [BR:
dinc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QNK01_05385 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
Spore_III_AA
OB_RNB
NACHT
Motif
Other DBs
NCBI-ProteinID:
WHZ33020
LinkDB
All DBs
Position
1095606..1096901
Genome browser
AA seq
431 aa
AA seq
DB search
MDEILTLKELESKTLKEIYQYARALKIPYYSQMNKKELSLAVIRAQEEKQGFFIVEGVLD
IMDQQDFGFLRPINYTPSKEDIYISGSQIKRFGLRNGDKVSGKARPPKPSERYYGLMHVN
LVNDKDPEDAKERSHFPALTPLYPDKQIVLETAQTKVATRIIDVISPVGFGQRGLIVAPP
KAGKTVLLKDIANGIAENYPDVELILLLIDERPEEVTDLERTVKGEVVSSTFDQLPQNHV
RVSELVLERAMRLVEDKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAALYKPKKF
FGAARNIEEGGSLTILATALVDTGSRMDDIIYEEFKGTGNAELHLSRELAERRIFPAIDI
KKSGTRKEELLLDGSRVESIWKVRHAMIGESLEFTDQFIRTLRKAKTNDEFFETFSESTL
AQSKNYRNKRR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaattctaacactaaaggaattagagagtaagacattaaaagaaatttaccag
tatgctagagcgttaaaaattccttattacagtcaaatgaataaaaaggaactttcttta
gcagttattcgggcgcaagaggaaaaacaaggcttctttatcgtggaaggcgtattagac
attatggatcagcaagattttggatttttgcgtcccatcaattacacgccgagtaaagaa
gacatttacatttccggttctcaaatcaaacgtttcggtttaagaaatggagataaagtt
tcaggtaaagctagacctcctaagccatccgagcggtattatggtttgatgcacgttaat
ctagttaacgataaagaccctgaagacgcaaaagaacgttctcatttccctgccttaaca
cctctttatccagacaaacaaatcgttttagaaacggcacaaacaaaagtggctacgcgt
attattgatgtcatatcgccagttggttttgggcagcgtggattgatcgttgctccgcca
aaagctggtaaaacagttttgctgaaagatattgctaatgggatcgcagaaaactaccct
gacgttgaattgattttattgctgatcgatgaacgaccggaagaagtaacagacttagaa
agaaccgtaaaaggggaagttgtttcttcgacatttgatcaattgcctcaaaaccatgtt
cgagtatcagaattagttcttgaaagagcgatgcgtttggtggaagataaacgagatgtc
gttattctaatggatagtatcactcgtttagctcgagcatacaatttggtcattccgcca
agcggaagaacattgagcggcggaatcgaccctgctgcattgtataaaccgaagaaattc
tttggagcggctcgaaacatcgaagaaggcggaagcttaacaattctggctacagctctt
gtagatactggaagccgtatggacgatattatttatgaagaatttaaaggtacaggaaat
gctgagctgcatctttcaagagaattggcagaaagacggattttcccagctatcgatatc
aaaaaatcaggtaccagaaaagaagaattattattggacggcagtcgcgtagagtctata
tggaaagttcgccacgctatgatcggtgaatccttagaatttacggatcaattcatacga
acgttgagaaaagctaagactaatgatgaattctttgagacgttttctgaatcaactttg
gcacaatctaaaaattaccgcaataaacgccgttaa
DBGET
integrated database retrieval system
