Desemzia incerta: QNK01_07380
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Entry
QNK01_07380 CDS
T09072
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dinc
Desemzia incerta
Pathway
dinc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dinc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNK01_07380 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dinc03019
]
QNK01_07380 (rny)
Messenger RNA biogenesis [BR:
dinc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QNK01_07380 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_NusA_2nd
KH_KhpA-B
OmpH
ATP-synt_B
KH_2
UPF0154
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WHZ31298
LinkDB
All DBs
Position
1493231..1494790
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AA seq
519 aa
AA seq
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MDFLSIAFAIVTLVVGLFVGYIIRKTTYEKELDDARNTATGILENANKEAETMKKEALLE
AKDESHRYRTEIEAELKERRAEISRQENRLVQREDKLDRKSSGLEKRERDIEANENRLSS
RQQQINDLEQKAKDLITDQQETLERIAALTREEAKEIIMAETREELSNETAVMIKNLEDE
AKKEADRRAKNLIATAIQRSAADQVSETTVSVVTLPNDDMKGRIIGREGRNIRTIESLTG
MDLIIDDTPNAVVLSGFDPIRREIAKMTLEKLIQDGRIHPARIEEMVEKSRKEMDDHIRE
IGEKATFDVGVHSLHPDLIKIVGRLQFRTSYGQNALSHSLEVAKLAGVMAAELGEDITLA
KRAGLLHDIGKALDHEVEGSHVEIGAEIARKYKENDTVINAIASHHGDIEATSVISVLVA
AADALSAARPGARSESLEHYIHRLEKLESIAKDFDGVEQSYAIQAGREVRIMVKPEVVDD
LTAVTLAREVRKQIEEELDYPGHIKITVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
ttggactttttaagtatagccttcgctatcgttactttagttgtcggtctgtttgttgga
tacatcatccgcaaaacaacttacgaaaaagaattggatgatgctagaaacactgcaact
ggtattttggagaatgcaaataaagaagcagaaaccatgaaaaaggaagcgttgttagaa
gcgaaggatgagagccacagatatagaactgaaattgaagctgaactgaaagagcgaaga
gcagaaatctctagacaagagaatcgattagttcaacgagaagataaactcgatcgaaaa
agtagcgggttagagaaacgtgaacgcgatattgaagcgaacgagaatcgactaagttcg
agacaacaacaaattaacgatttagagcaaaaggcaaaagatctgattacggatcaacaa
gaaacactagagcgtattgcagctcttaccagagaagaagccaaagaaattattatggcg
gagactcgagaagaattgtctaatgaaacagctgtaatgatcaagaatcttgaagatgaa
gctaagaaagaagcagatcgcagagcgaagaatttaatcgctacagctattcaacgtagt
gctgctgatcaagtgtctgaaacaacagtttctgttgtgacattgccgaatgatgatatg
aaaggccgcatcattggacgcgaaggtcgaaacattcgtaccattgaatcattaacaggt
atggatttaattatcgatgatacgcctaatgctgttgtacttagcggatttgatccaatt
cgtagagaaattgcaaaaatgactttagaaaaattgattcaagatggcagaattcaccca
gcacgtattgaggaaatggttgaaaaatctcgtaaagaaatggatgaccatatccgtgaa
attggtgaaaaagctacatttgatgtaggggttcattcgttacatcctgatttgatcaaa
attgtcggtcgtttgcagtttagaacaagttatggtcaaaatgcgttatcgcattctcta
gaagtagctaaattagctggtgtcatggctgccgaattaggagaagatatcacattggct
aaaagagctggattattgcatgatataggtaaagccttagatcatgaagtagaaggttct
cacgtagagattggggcagagattgcccgtaagtacaaagaaaatgatacagtgatcaat
gctatagcttctcatcacggagatatcgaagcaacatccgtaatttctgtattggtagct
gcagcagatgccctatctgccgctagaccaggtgcaaggagcgaatcattggagcactac
atccatagacttgagaagttagaatctattgcgaaagattttgacggtgtggaacaaagt
tatgctattcaagctggacgtgaagtcagaatcatggtcaaaccagaagttgtggatgat
ttgacggctgtaactctagcgcgtgaagtgcgtaagcagatcgaagaagaattagattat
cctggacacatcaagataacggtgattcgagaaacaagagctgttgagtacgcaaaataa
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