Desemzia incerta: QNK01_08510
Help
Entry
QNK01_08510 CDS
T09072
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dinc
Desemzia incerta
Pathway
dinc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dinc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNK01_08510 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dinc03019
]
QNK01_08510 (pnp)
03016 Transfer RNA biogenesis [BR:
dinc03016
]
QNK01_08510 (pnp)
Enzymes [BR:
dinc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QNK01_08510 (pnp)
Messenger RNA biogenesis [BR:
dinc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QNK01_08510 (pnp)
Transfer RNA biogenesis [BR:
dinc03016
]
Prokaryotic type
tRNA degradation factors
QNK01_08510 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
M20_dimer
S1_2
Motif
Other DBs
NCBI-ProteinID:
WHZ31512
LinkDB
All DBs
Position
1741313..1743451
Genome browser
AA seq
712 aa
AA seq
DB search
MTEKQVFTTELGGRPLTVEIGQLAKQANGAVLVRYGDTVVLTAAVASKDAMDVDFFPLTV
NYEEKMYAVGKIPGGFIKREGRPSENATLTARLIDRPIRPMFADGFRNEVQITNTVMSVE
QDCSPEMAAMLGSSLALVVSDIPFNGPIAGVNVGRVNGELIINPTVQQDEESDIQLTVAG
TKKAINMVESGAAEVSEEGMLDALMFGHEEIKKLVAFQEEIQAAVGKEKMEVLLLEVDAD
VQEEVQAAYKEKMVNAIQIFDKQERAEQTEAVKKEAIAFFEAKYADHDEAARINKEVKKI
VEDLEKDEVRRLITEEKIRPDGRKIDEIRPLASETGVLPRAHGSGLFTRGQTQALSIATL
APLGEHQIIDGLGIEESKRFIHHYNFPQFSVGSTGRGRAPGRREIGHGALGERAMAQVIP
NEKDFPYMIRVVSEVLESNGSSSQASICAGILALMDAGVPIKAPVAGIAMGLVSDGSNHT
VLTDIQGLEDHLGDMDFKVAGTAEGITALQMDIKIQGITQEILTEALTQAKKARLEILDE
LVSTISEPRKELSKYAPKIEMMQIKPEKIKVVIGRGGDQINAIIEETGVKIDIDQDGKVS
IASDNAEMIQRAKEIIEELTKEIEVGQVYDGTVKRVEKFGAFVEIAKGKDGLVHISQLDT
KRVAKVEDVVNVGDSLKVKVIEIDRQGRINLSHRVLMEEEQQESNETETTTN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaacaagtttttacaactgaacttggcggacgccctttaacagttgaaata
ggacagttagccaaacaagcaaatggggccgttttggttcgttatggagacacagttgtt
ttaacagctgctgtagccagtaaagatgctatggatgtagatttcttcccgttaacagta
aactacgaagaaaaaatgtatgcagtaggtaaaatcccaggaggtttcattaaacgtgaa
ggccgtcctagtgaaaatgctacattgactgctcgtttgattgaccgcccaattcgtcct
atgtttgcagatggtttccgtaatgaggtacaaatcactaatacagttatgtcagtggaa
caagactgctctccagaaatggcagctatgcttggatcatctttggctttagtggtttct
gacattccatttaacggacctattgcaggagtaaacgttggacgtgtaaacggagagttg
atcatcaatccaacggttcaacaagacgaagagtcggatattcaattaacggtagctgga
acaaaaaaagcgatcaacatggttgaaagtggtgctgcagaagtatctgaagaaggtatg
ttggatgcattgatgttcggtcatgaagaaatcaaaaaattagtggctttccaagaagaa
atccaagcagctgttggaaaagaaaaaatggaagtcttattattagaagtagatgcagat
gtacaagaagaagtacaagcagcttacaaagaaaaaatggtaaatgcgattcaaatcttt
gataaacaagaacgcgctgaacaaactgaagcagtgaaaaaagaagctattgctttcttt
gaagctaaatacgctgatcatgatgaagcagctcgtatcaacaaagaagtgaaaaaaatc
gttgaagatcttgaaaaagatgaagtacgccgtttgattacggaagaaaaaatccgtccg
gatggtcgtaaaatcgatgagattcgtccattagcttcagaaacaggtgttttaccaaga
gctcacggttctggtttgtttacacgtggacaaacacaagcattgtctattgcgactcta
gcgcctcttggagaacatcaaattattgatggcttaggtattgaagaaagcaaacgattt
atccaccattacaatttcccgcaattttcagttggtagcactggccgcggccgcgcacca
ggcagacgtgaaattggacatggggctttaggtgaacgtgctatggctcaagtcatccct
aatgaaaaagatttcccttacatgattcgtgtggtttcagaagttttagaatcaaatggt
tcttcttctcaagcaagtatctgcgcaggaatcttggcattgatggatgctggtgtacct
atcaaagctccagttgctggtattgcaatgggattggtcagcgacggaagcaaccacaca
gtcttaacggatatccaagggttggaagatcacctaggcgatatggactttaaagttgct
ggaacagctgaaggaatcacagcattacaaatggatatcaagatccaaggaatcactcaa
gaaattttaacggaagcattgactcaagctaaaaaagctcgtttagaaatcttagatgaa
ttagtatctactatctctgaaccgcgcaaagagttgagcaaatacgctccgaaaatcgaa
atgatgcaaatcaaaccagaaaaaatcaaagtcgttattggacgcggtggagaccaaatc
aatgctattatcgaagaaactggcgttaagatcgacattgatcaagacggtaaagtcagc
attgcttcagataatgcagaaatgatccaacgtgcaaaagaaatcatcgaagaattgacg
aaagaaatcgaagttggtcaagtttacgatggtactgtaaaacgcgttgaaaaatttggc
gcttttgttgagatcgctaaaggaaaagacggcttagtgcatatctctcaattagatact
aaacgtgtggcaaaagtagaagatgtcgtaaatgttggcgactctctgaaagtcaaagtc
attgaaatcgatcgtcaaggtcgtatcaatctctctcacagagtattgatggaagaagaa
caacaagaatctaacgaaacagaaacaacaactaactaa
DBGET
integrated database retrieval system
