Desemzia incerta: QNK01_08865
Help
Entry
QNK01_08865 CDS
T09072
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dinc
Desemzia incerta
Pathway
dinc03030
DNA replication
dinc03430
Mismatch repair
dinc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dinc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNK01_08865 (dnaE)
03430 Mismatch repair
QNK01_08865 (dnaE)
03440 Homologous recombination
QNK01_08865 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dinc03032
]
QNK01_08865 (dnaE)
03400 DNA repair and recombination proteins [BR:
dinc03400
]
QNK01_08865 (dnaE)
Enzymes [BR:
dinc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QNK01_08865 (dnaE)
DNA replication proteins [BR:
dinc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QNK01_08865 (dnaE)
DNA repair and recombination proteins [BR:
dinc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QNK01_08865 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WHZ31581
LinkDB
All DBs
Position
1816389..1819718
Genome browser
AA seq
1109 aa
AA seq
DB search
MSFVPLQVKSAYSLLQSTLSVEGLVAAAKKRGYQSLALTDHNVLYGAVDFYKLCLKHQLK
PIIGLTLDMQGIIKTEHSFPLVLLAETNQGYKHLVALSTKKMMEPETLFSPNDLAPYSEG
LIALTPGITGEIEQYLLAGKIEEAEKSIVAYKRLFSPEHFYLGIQLHEELMPIKDALLQT
AKENGLKTAALTDVQYLNEEDAFSLKVLKAIDKGEQLEEHQKVLSGTRHLGEPDQVEQQF
VDAGLTEAVQQTRNIANRIKIEIPLQQRLLPKYPIQTTDTTSAFLKQLCLDGLKKRVPEA
DERYFKRLEHELTVIQKMGFEDYFLIVWDVMAYAHRAKIVTGAGRGSAAGSLVSYVLEIT
DVDPIEYNLLFERFLNEERYNMPDIDLDFPDNRREEVLQYVKEKYGKDHVAQIITFGTLA
AKMALRDTARVFGLKQDESNEWSKAIPNQLGITLEEAYKKTSALQQLVKQSERNQLIFKT
ARNIEGLPRHASTHAAGVVISDQKLSSIIPLQSGSSSIALTQYAMGNVEEIGLLKMDFLG
LKNLTILGDALKTIEYDTGKQIRLQDIPMDDKETLELFQKADTVGIFQFESNGIKNVLRK
LHPESLEDIAAVNALYRPGPMEQIDVFIKRKKGEVAMEYPHESLKDILNVTYGVMVYQEQ
VMQVASKMAGYSLGQADILRRAIGKKKKELIDAERVHFTAGAADKGYSEQDARQVYDYIE
RFANYGFNRSHSIAYSFIGYQMAYIKVHYPQAFYIALLNSALHNANKVKEYLLEAKKKKI
DVYHPDINTSYGRFTKKDAGILFGLSSIKGLRRDYIAEIIQNRKANGTYKDFIDFLRRMD
TKWVKEDYILPLIYVGAFDGFRYSRGTLLNSLESILTSVKFSGNNIGLFDVLQPKYEEAP
DLTPQEKLEAENTYLGVYLSGHPTEKYEDILKSKQGIYVKDAVENQKIRLIGQVKDVKKI
TTKKGEPMAFMTVSDTTGDISLTLFPTVYRKYIQNVAQNKVLYVEGKTEVRQGQGLQILV
SHLKEAAEIEEEKKVKKCFVRIEQQYEDGETLNRLKELFTAHSGSIPVILYYMRTNKKLG
LQEAFWVNESSDLVKSVEELLGKGNIIID
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttttgtaccattacaagttaagagtgcctattccttgcttcaaagtactttgtcg
gtagagggattagtagcagccgctaaaaaaagaggttatcaatctttagctttgactgac
cataatgtcctttatggtgctgtcgacttctacaaattatgtttgaaacatcaattaaaa
ccgatcataggattaactttagatatgcaaggcatcataaagacagaacactcttttcct
ttagtgttgctggctgaaacgaaccaaggatacaaacacttagtggctttgtctactaaa
aagatgatggagcctgaaactttattttctcctaatgatctagcaccttactcagaaggt
ttgattgctttgacacctgggataacgggtgaaatcgagcagtatttattagcgggtaaa
atagaagaagctgaaaaatcaatcgttgcttacaaaaggttattctctccagaacacttt
tatcttggaattcagctgcacgaagagttgatgccgataaaagatgcgcttttgcagacc
gccaaagaaaatggtctgaaaacagcggctttgactgatgtacagtatttaaacgaagaa
gatgccttcagcttaaaagtattgaaagctattgataaaggagagcaattagaggaacac
caaaaggtcttgtctggcactcgtcatcttggtgaacccgatcaagtagaacagcaattt
gtggatgctgggcttacggaagctgttcaacagacaagaaacattgcgaatcgtatcaag
atagaaattcctttacaacaaaggttgttgcctaaatatcctatccaaacaacggataca
acttcagcgtttttaaaacaattgtgtttagacggattaaagaaaagagttccagaagca
gatgaaagatacttcaagagattggaacatgaattgactgtgatccagaaaatgggtttt
gaagattactttttaatcgtatgggatgttatggcttatgctcatcgcgcaaaaatcgtt
acaggtgcaggccgaggatctgcagcaggttctttagtgtcgtacgttctagaaataaca
gacgtggatcctattgaatacaatctgctgtttgaacgcttcttaaatgaagagcgatat
aatatgccggatatcgatttagatttcccagataatcgaagagaagaagtattgcaatac
gtaaaagagaaatacggtaaagatcacgttgcacagatcattacctttggaacacttgct
gccaagatggctttacgagatacagctcgtgtttttgggctgaaacaagacgaatccaat
gagtggtcaaaagcgatcccgaatcaattagggattactttagaagaagcgtacaaaaaa
acttcggcattgcagcaactggtcaaacagtcggaacgaaaccagttgattttcaaaact
gccagaaatattgaagggttgccaagacatgcttccactcacgcagcaggagttgtcatc
agtgaccaaaaactgagcagcatcattcctcttcaatccggaagcagttctattgcattg
acccaatatgctatgggaaatgtggaagaaatcggactgttgaaaatggactttttagga
ttgaagaacttaacgattttgggagatgcgttaaaaacaattgaatatgacaccggaaag
cagattcgattgcaagacattccgatggatgataaagaaaccttagaactgttccaaaaa
gcagacacagtaggaatctttcagtttgaatccaacggtataaagaacgtgttgcgcaag
ctgcatccagaatccttagaagacattgcagccgtcaatgctttatatcgaccaggtccc
atggaacagatcgatgtgtttatcaaacggaaaaaaggcgaagtggccatggaataccca
catgaaagcttaaaagatattctaaatgtcacgtatggtgtcatggtgtatcaagaacaa
gtcatgcaagtggcgtctaaaatggcggggtactctttagggcaagcagatattcttaga
agagccattgggaaaaagaaaaaagaattgatcgatgcggaaagagtgcattttacagct
ggtgctgcagacaaagggtattcagagcaagatgcaagacaagtttatgactatatcgaa
cgttttgccaattacgggttcaaccgatctcattccatcgcttattcttttatcggctac
caaatggcttacatcaaggtccattatccgcaagccttttatattgctttgttgaattcg
gctttgcataacgccaataaagtaaaagaatatttactagaagctaagaaaaagaaaatc
gatgtttatcatccagatattaataccagttacggacggtttacgaaaaaagatgcaggt
attttatttggtcttagttctataaaaggattgagaagagattatatagctgaaattatc
caaaatcgaaaagcaaatggcacctataaagatttcattgattttttaagaagaatggat
accaaatgggtaaaagaagattatattctgccattgatctacgttggcgcttttgatgga
ttccgttacagtagaggaacgttgttgaattccttagagagtattttgacaagtgtaaaa
ttcagcggaaataacatcggcttgtttgatgtactgcagccaaaatatgaagaagcacct
gatttgactcctcaagaaaaattagaggcggaaaatacctacttaggggtctacttatca
gggcatcctactgaaaagtacgaagacattttaaaaagtaagcaaggtatttatgttaaa
gatgctgttgaaaatcaaaaaatccgattgatcggacaggtaaaagatgttaaaaaaatc
actactaaaaaaggtgaaccaatggcttttatgacggttagtgatactacgggagatatt
tcattgactttgttcccgacagtgtaccgcaaatacattcagaatgttgcccaaaacaaa
gttctttatgtagaagggaagacggaagtcagacaaggtcaaggtctgcaaattttagtc
tctcaccttaaagaggcagcagagatagaagaagagaagaaagtcaaaaaatgttttgtc
cgaattgaacaacagtatgaggatggcgaaacgttaaatcgactgaaagaactctttaca
gcacactcaggctctattcctgtaattttgtactacatgagaacgaataaaaaactaggg
ctccaagaagcattctgggtcaatgagtcctctgatttggtgaaatcagttgaagaattg
ttaggaaaagggaacataatcatagattga
DBGET
integrated database retrieval system
