Desemzia incerta: QNK01_09170
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Entry
QNK01_09170 CDS
T09072
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dinc
Desemzia incerta
Brite
KEGG Orthology (KO) [BR:
dinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dinc03032
]
QNK01_09170 (topA)
03400 DNA repair and recombination proteins [BR:
dinc03400
]
QNK01_09170 (topA)
Enzymes [BR:
dinc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QNK01_09170 (topA)
DNA replication proteins [BR:
dinc03032
]
Prokaryotic type
DNA Topoisomerases
QNK01_09170 (topA)
DNA repair and recombination proteins [BR:
dinc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QNK01_09170 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
Zn_ribbon_RPB9
HypA
Nup188_N
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WHZ31639
LinkDB
All DBs
Position
1878956..1881034
Genome browser
AA seq
692 aa
AA seq
DB search
MAYKYLVIVESPAKAKTIEKYLGKNYKVVASLGHIRDLPKSRMAIDTENNYEPEYISIRG
KGPLIKELKKFAKKADKVYLAADPDREGEAIAWHLCHLLGLDIEDKNRVVFNEITKDAVK
GAFKEPRSINMDLVDSQQARRVLDRLVGYTISPILWKKIKKGLSAGRVQSVALKLICDRE
EEINQFEPEEYWTIDGNFKKGTKKFKAAFYGVNGKKTKLSDSKDAQKIIKQMDGDEFEIT
KVVKKERKRNPSLPFTTSSMQQDAARKINFKTRKTMMIAQQLYEGISLGRGGAVGLITYM
RTDSTRISDTAKNEVYEFIQKTYGDEYTNSKARVGKKAESSQDAHEAIRPSSVMRTPEEI
QKYLSKDQYKLYNLIWSRFVASQMKPAVFDTMTVDLERNDVLFRANGQKMKFPGYQKVYI
ESTDSGKAEKDNVLPPLEEGETATTVDIEPKQHFTQPPARFSEATLIKTLEENGVGRPST
YAPTLDTIQRRYYVKLAAKRFEPTELGTIVNGMIAEFFPQIVDVHFTAEMEKNLDQVEIG
EEEWKNVIDQFYKPFKKTVEVAEEQMEKIQIKDEPAGFDCEVCGHPMVIKMGRYGKFYAC
SNFPECRNTKAIVKDIGVTCPTCNKGNVIERKSKKNRIFYGCDRYPDCEFISWNKPVGRN
CPKCEHHLEEKKVAKGKQVICSNCDYKEELQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttggcctataaatatttggtgatcgttgagtcgcctgctaaagcaaaaacaattgaaaag
tatttaggaaaaaattacaaagtggtggcaagtttaggtcatatcagagatcttcctaaa
agtcgtatggcaattgataccgaaaacaactatgaacccgaatacatttctatcagagga
aaaggccctttgatcaaagaattgaaaaaatttgcaaaaaaagctgataaagtctatctc
gcagccgatccggatagagaaggagaagctattgcatggcatttatgccacttattaggc
ttagatatagaagataaaaatcgtgttgtctttaatgagatcacaaaagacgctgtaaaa
ggtgcttttaaagaaccgcgctccatcaatatggatttagtagactctcaacaagctaga
cgtgtactagaccgtttagttggatatacaatcagtcctattttatggaaaaaaatcaaa
aaaggcttaagtgcgggaagagttcaatcagtagccttgaaattgatttgcgaccgtgaa
gaggaaatcaatcagtttgaacctgaagagtattggacgattgatggtaacttcaaaaaa
ggaacaaagaaatttaaagcagccttttatggagtaaatggtaaaaagactaaattgtct
gattccaaagatgctcaaaaaatcatcaaacaaatggatggcgatgaatttgagattact
aaagtagtcaaaaaagaacggaaacgtaacccgtcccttccatttactaccagcagtatg
caacaagatgcagcgcgtaaaatcaatttcaaaacacgtaaaacaatgatgatcgctcaa
cagttatacgaaggtatttctcttggacgtggtggagctgtcggattgatcacttacatg
cgtacagattctactcgtatctcagatacagctaaaaatgaagtgtatgagttcatccag
aagacttacggcgacgaatatacgaattcaaaagcacgtgtagggaaaaaagctgaaagt
tctcaagatgcgcatgaggctattcgaccttctagtgtcatgagaaccccggaagagatt
caaaagtatctatcaaaagatcagtataaattatacaacctgatctggtctcgctttgta
gctagtcaaatgaaaccagccgtttttgacacgatgacagtagatttggaacgcaatgat
gttctgtttagagcgaatggtcaaaaaatgaagttccctggatatcaaaaagtctatatc
gaatcaacggatagcggaaaagcagaaaaagataatgttttaccgcctttagaagaaggg
gaaacagctaccacagtggatattgagccgaaacaacattttactcaaccacccgctcgt
ttctcagaagctacgttgatcaaaacgctggaagaaaacggtgtaggtcgtccttcaact
tatgcgcccacattggatacgatccaaagaagatattacgttaagttagctgctaaacga
tttgaacctactgaattaggaactatcgtcaatggcatgatcgcagaattcttccctcaa
attgtagacgtccacttcactgcagaaatggaaaaaaatctggaccaagtggaaattgga
gaagaagaatggaaaaacgttattgaccaattctacaaaccgtttaaaaaaacagttgaa
gtagcagaagaacaaatggaaaaaattcaaatcaaagatgaaccggctggttttgactgt
gaagtttgtggtcatccgatggtgatcaaaatgggtcgatatggaaaattctatgcatgc
agtaatttccctgaatgtcgaaatacgaaagctatcgttaaagatattggagtgacttgt
ccaacgtgtaataaaggaaacgtcatcgaaagaaaatcgaagaaaaaccgtattttctat
ggctgcgaccgttacccagactgcgagttcatctcttggaataaaccagttggccgaaac
tgtcctaagtgtgagcatcacttagaagaaaagaaagtcgctaagggcaaacaagtcatt
tgcagcaactgtgattataaagaagaacttcaaaaataa
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