Desemzia incerta: QNK01_09600
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Entry
QNK01_09600 CDS
T09072
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dinc
Desemzia incerta
Pathway
dinc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dinc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QNK01_09600 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dinc03021
]
QNK01_09600 (rpoD)
Transcription machinery [BR:
dinc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QNK01_09600 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Fan1_SAP
Motif
Other DBs
NCBI-ProteinID:
WHZ31724
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All DBs
Position
complement(1963914..1965020)
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AA seq
368 aa
AA seq
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MAEKQTANKETYEQAVKRVISEYKAKGIIKYNELADQIATPFSLDATDMDNLIQRVEDAG
IGVVGEDGNPTERQLKKEEEEEKPEDLTAPPGVKINDPVRMYLKEIGRVDLLSADEEVSL
AKRIEEGDPEAKQSLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYTKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRIQRQLLQDLGRDPTPEEIG
AEMDLPTEKVREILKISQEPVSLETPIGEEDDSHLGDFIEDHDATSPEDNASYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KQLKDFLE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaacaaactgcaaataaagaaacgtatgaacaagcggtaaaaagagttatc
agcgagtacaaggcaaaagggattatcaagtacaatgaattagctgatcaaattgcaacg
cctttcagtttagacgctacagatatggataatttaatccaacgcgttgaagatgctgga
attggtgttgtcggagaagatggaaatcctactgaacgacaactgaaaaaagaagaagag
gaagaaaaaccagaagatctgactgctcctccaggcgttaagatcaatgatcctgttcgt
atgtatttaaaagaaatcggtcgtgtagatctgttgtctgccgacgaagaagtttcttta
gctaaacgaatcgaagaaggagatcctgaagcgaaacaaagtttggctgaagccaacttg
cgtttagtagtaagtattgcaaaacgttatgtaggacgtggaatgcaattcttagacttg
attcaagaaggtaacatgggattgatgaaagctgttgagaaattcgactatactaaaggg
tttaaattctctacgtatgcaacttggtggatcagacaagcaatcactcgtgctatcgct
gaccaagcgagaacgatccgtattccagtgcacatggttgaaaccatcaacaaattagtg
cgtatccaacgtcaattattacaagatttgggaagagatcctacaccagaagaaatcggt
gctgaaatggacttgccaactgaaaaagtacgtgaaatcttaaaaatctctcaagagcct
gtttctttagaaacgcctattggtgaagaagatgattctcatttaggagacttcatcgaa
gaccacgacgcaactagtcctgaagacaatgcttcttacgaattgttgaaagaacaatta
gaggatgtattggatactttaacagaccgtgaagaaaacgtattgcgtttacgttttggt
ttagatgatggccgtacaagaacacttgaagaagtaggtaaagtcttcggtgttactcgt
gagcgtattcgtcaaatcgaagcaaaagctctacgcaaattgcgccacccaagcagatct
aaacaattgaaagatttcttggaataa
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