Desemzia incerta: QNK01_09920
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Entry
QNK01_09920 CDS
T09072
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dinc
Desemzia incerta
Pathway
dinc03410
Base excision repair
dinc03430
Mismatch repair
dinc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dinc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNK01_09920 (recJ)
03430 Mismatch repair
QNK01_09920 (recJ)
03440 Homologous recombination
QNK01_09920 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dinc03400
]
QNK01_09920 (recJ)
DNA repair and recombination proteins [BR:
dinc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QNK01_09920 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QNK01_09920 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QNK01_09920 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WHZ31787
LinkDB
All DBs
Position
complement(2040149..2042482)
Genome browser
AA seq
777 aa
AA seq
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MIKARMKWKLVNEEQHKPLIKELAEQLSYSPLFISLCLQRGLDTEEKIKSFIQPTEEGIH
DPFLMHDMERAVERIMMAVENGDKIVIYGDYDADGVTSTSVLLETLEMIGANVDFYIPNR
FTDGYGPNTKAFKKLIQEGCQLIVTCDNGVSGHEAIQKANELGVDVIVTDHHELPEQLPQ
AYAVVHPRHPEGHYPFGDLAGVGVAFKVATALLGEMPVELLDLVAIGTIADLVSLRDENR
VLAMQGIEALKQTQRIGLNALYEIANVNKNDLSEESVGFIIGPRLNAPGRLGDASPAVKL
LTTFDYSEAQSIAQFIQSKNEERQKYVKQITDEAFDMLEEIDTETNVYVLAKEGWHEGVL
GIVASKVVGKTGKPTIVLNIDQANGTAKGSGRSVQAFHLYEALDTMRPLTAAFGGHHMAA
GLTVPLENIEKIQAKLNEYAVTQQVAGEMGEEVQIDKVLEISDLTVDAIEEINQLAPFGT
DNPKPTFLLDDVEVQSIRKIGADSTHLKMSVQLDQYLLDSIGFGFGELVDKIPEKTVLST
IGKLEINEWNGARKLQFRVEDVAVKGIQCFDYRGTQIPETLWKNEQADFVFFDPENDMRF
KDKIHHSSKSHNVQTRKEAKEFKMENKHLVLVDCPPSMTMLSLVLEDNQPENISYSFYSS
SNNYLEGMPSREKFAETYKFIRSHQNIDVKNQLSILAKTLNIKENRLIFIIQVFFEVGFV
KIDNGLLNQIENPEKKDLTQALTYQKKLQRISAEEKLVYSHSWEVDKWLLQQLSTGE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaagctcgtatgaaatggaaattagtaaatgaagaacaacataaaccgctcatt
aaagaactagctgaacaactgtcttattcgccgttgtttatttcgctgtgtctgcaaaga
gggttagacaccgaagagaaaataaaaagttttattcaacctacagaagaaggcatacac
gatccttttttgatgcatgacatggaacgggcagttgaacgcatcatgatggcagtagaa
aacggagataaaatcgttatttatggagattatgatgcagatggtgtgacaagtacgtct
gtattgttggaaactcttgaaatgattggggcaaacgtggatttctatattccgaatcgc
tttacagatggatatgggcctaacacaaaagcttttaaaaagttgatccaagaaggctgc
cagttgattgttacttgcgacaatggggtctcaggacatgaagcgattcaaaaagcgaat
gaattgggtgtagatgtcatcgtgacggatcaccatgaattacctgagcagctgccacaa
gcatatgctgtggttcatccgcgtcaccctgaaggccattatccatttggagacttagca
ggtgtaggagtggcttttaaagtagctactgctttgctgggtgaaatgcctgtagagtta
ttggatttggtcgctataggaacgattgccgatttagtttctttacgagacgagaacaga
gtcctagctatgcaaggaatcgaagcattgaaacaaacacaacgcataggcttaaatgcg
ttgtatgagatcgctaatgtgaataaaaacgatttaagtgaagaatccgtcgggtttatt
ataggacctagactaaatgcacctggacgactaggcgatgcttcgccggctgtaaaatta
ttgaccacatttgattacagtgaagcccaatcgattgctcagttcattcaatcaaaaaat
gaagagcgacaaaaatacgttaagcaaatcaccgatgaagcgtttgacatgttggaagaa
atcgatacagaaaccaatgtttatgtactagcgaaagaaggatggcatgaaggcgtatta
ggaatcgtagccagcaaagttgttgggaagaccggtaagcctacgattgttttaaacatc
gatcaagcaaatggaacggctaaaggttcgggcagaagtgtacaagcctttcatctgtat
gaagcattagatactatgcgcccattaacagcagcttttggcggtcaccacatggctgca
ggactaactgtaccgctggaaaacattgagaaaattcaagcgaaattaaatgaatatgca
gttacacagcaagtggctggagaaatgggagaagaagtccaaatcgataaggtgcttgag
ataagtgatttaacggttgatgcaattgaagaaatcaatcagttagccccatttggcacc
gataatccaaaaccgacttttttattggatgatgttgaagttcaatcgattcgaaaaatc
ggagcggatagtacgcatttgaagatgtctgtgcaacttgatcaatatcttttagacagt
attggtttcggatttggagagttagtagataagattcctgagaaaaccgtgttgtctact
atcggaaaattggagatcaatgagtggaacggagcaagaaaattgcaattccgagtggaa
gatgtagctgtaaaagggattcaatgctttgattatcgtgggactcagataccggaaact
ctatggaagaatgagcaagcggattttgtgttttttgatcctgaaaatgatatgcgtttc
aaagataaaatccatcattccagcaagagccacaatgttcaaactcgaaaagaagctaaa
gaattcaaaatggaaaataaacatcttgtactggtcgactgtccaccatctatgacgatg
ctttcgttagtgctggaagacaatcagccggagaatatttcttattctttttatagttca
tctaataactatttagaaggaatgccgagtagagaaaagttcgctgaaacgtataagttt
attcgttctcatcaaaacattgatgtaaaaaatcaactgtcaattttagcgaagacatta
aatatcaaagaaaatcgattaattttcattatacaggtgttttttgaagtcggatttgtt
aaaatagacaatggacttttaaatcaaatcgaaaaccctgagaaaaaagatttgactcaa
gccctaacttatcaaaagaaattgcaacgaatcagtgcagaagaaaaattagtgtatagt
cactcctgggaagtagataagtggctattgcaacaattatccactggcgaataa
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