Desemzia incerta: QNK01_10270
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Entry
QNK01_10270 CDS
T09072
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
dinc
Desemzia incerta
Brite
KEGG Orthology (KO) [BR:
dinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dinc03019
]
QNK01_10270
03009 Ribosome biogenesis [BR:
dinc03009
]
QNK01_10270
Enzymes [BR:
dinc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QNK01_10270
Messenger RNA biogenesis [BR:
dinc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNK01_10270
Ribosome biogenesis [BR:
dinc03009
]
Prokaryotic type
rRNA helicases
QNK01_10270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Helicase_RecD
PhoH
Microtub_bd
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WHZ31850
LinkDB
All DBs
Position
complement(2110114..2111448)
Genome browser
AA seq
444 aa
AA seq
DB search
MGHPFEKFNLQPFLIAAIEELGFKEPTEVQERLIPAIQKGRSVIGQSQTGSGKTHTFLLP
LMNKIDATRNEVQVVVTAPSRELAEQLYQAAVQLAEKSDPAVIVQNFVGGTDKKRQLSKL
TNTQPHIAIGTPGRILDLVNANGLLVHTAQYFVVDEADMTLDMGFLEDVDKIAGKMPDKL
QMLVFSATIPESLKPFLKKYMENPLFEQIAPKDVISPSIENWLISTKGRERIDIVYQLLT
IGQPYLAIVFANTKAKVEEIADGLKSRGLKVATIHGDIPPRERKRVMRQIQNLEFQYVVA
TDLASRGIDIEGVSHVINAEIPNDVEFFVHRVGRTGRNNMKGIAITLYAPSEENFVNDIE
KIGVTFEPKTISKGEIKETYDRQRREKRTDTAKDTLSPSLRGYVKKKKKNVKPGYKKKIS
REIKKNNQRKRRIEKNRGEKSKKS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggacatccatttgaaaaatttaatttacaaccatttttgatagcagcaatcgaagaa
ttgggattcaaggaaccaactgaggttcaagagagattgataccggctatccaaaaaggc
agaagtgttattggacaatcacagacaggatctggaaaaacacatactttcttgctgcca
ttaatgaataaaattgatgcaactcgtaatgaagtgcaagttgttgttactgcacctagt
cgtgagttagcggaacagttgtatcaagctgctgttcagttagctgaaaaatctgaccct
gcagtaattgttcagaactttgtcggcggaacagataaaaaacgtcaattaagcaaatta
actaatactcaaccgcatattgctatagggactccaggacgaatcttagacttggtaaat
gctaacggactattggttcatacagcgcagtactttgtagtggatgaagctgatatgaca
ttagatatgggattcttagaagacgttgataagatagctggaaaaatgccggacaaattg
caaatgctggttttctctgcaacaataccagaatcattgaaaccattcttgaaaaagtat
atggaaaatcctttatttgaacaaatcgcaccaaaagatgttatttcaccatccattgag
aactggttgatttcgactaaaggtagagaacgtattgatatcgtctaccaactgttaacg
attggtcagccttacttggcaattgtttttgcaaacacaaaagcaaaagtagaagaaatc
gctgatggcttgaaatcaagaggattaaaagtggctactattcatggagatattcctccg
cgtgagcgtaaacgggtaatgagacaaattcaaaaccttgagttccaatatgttgtagcg
acagatttagcttctcgaggaatagacattgaaggagtatctcatgtcattaatgctgag
attccgaatgacgtagaattctttgttcaccgagttgggagaacaggaagaaacaacatg
aagggaatcgcaatcacattgtatgctccaagtgaagagaactttgtaaatgatattgag
aaaatcggagttacatttgaaccgaaaacaatctcaaaaggcgagattaaagagacttat
gaccgtcaacgtcgtgagaagagaacagacacagcaaaagatacgttaagtccttcttta
cgcggttacgtgaaaaagaaaaagaaaaatgttaaaccaggatacaagaaaaaaatcagt
cgtgaaatcaaaaagaacaaccaaagaaaacgtcggattgagaaaaaccgtggagagaaa
tcaaagaaaagttaa
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