Desemzia incerta: QNK01_11505
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Entry
QNK01_11505 CDS
T09072
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dinc
Desemzia incerta
Pathway
dinc03420
Nucleotide excision repair
dinc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dinc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QNK01_11505 (pcrA)
03430 Mismatch repair
QNK01_11505 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dinc03400
]
QNK01_11505 (pcrA)
Enzymes [BR:
dinc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNK01_11505 (pcrA)
DNA repair and recombination proteins [BR:
dinc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QNK01_11505 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
QNK01_11505 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Halo_prof
Terminase_6N
DUF8156
PRTase-CE
DEAD
Motif
Other DBs
NCBI-ProteinID:
WHZ32055
LinkDB
All DBs
Position
complement(2368904..2371132)
Genome browser
AA seq
742 aa
AA seq
DB search
MVLREELLNGMNPRQKEAVIHTDGPLLIMAGAGSGKTRVLTHRIAYLIQEKNVNPWNILA
ITFTNKAAKEMKERVSRLIRDGGSEVWVSTFHSMCVRILRRDIDRIGYTRSFTISDPGEQ
QTLMKRILKERDIDPKKFNPRAILAEISNAKNELLTAEQYRDTATSYFQRIVADCYDDYQ
RELRRNQAVDFDDLIMLTARLFKESPETLQHYQAKFQYIHVDEYQDTNHAQYTLVQLLAD
RFRNICVVGDADQSIYGWRGADMENILNFEKDYSDAKVVLLEQNYRSTKYILQAANDVIG
NNANRKDKKLWTDNHEGEKISYYRAQSEGDESRYVVSKIQEEMKENGLGYGHFAVLYRTN
AQSRKIEESLLQSNIPYKMVGGHKFYDRKEIKDVLAYLRLVANPDDNMSFERVVNVPKRG
IGPGTVEKLRAFANQYDWSLLEAAQNVALTSITGKASKALEGFGHMLKDLQKMQEYLPVT
ELVEELLKRSGYKESLELEKSLESESRLENIQEFLSVTQQFEKDNAGGETDLLTFLTDLS
LVSDLDNLEVENGEVTLMTLHAAKGLEFPVVFLIGMEEGIFPLSRAMMEENELEEERRLA
YVGITRAERKLYLTNAYSRVLYGRTQANTPSRFIQEISDDVMDLMHRETTSVPFRSNAPF
INKEKRASSTPYPTQAPVSSKVSSGADKVEWNVGDKATHKKWGVGTVVKLTGNADNLQLD
IAFPAPTGIKRLLAAFAPIEKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtggtattacgagaagaattattaaatggaatgaatccgcgtcaaaaagaggctgtgatc
catactgatggaccactcttgattatggcaggggctggtagtggaaagaccagagtacta
actcatcgtatcgcctatttgattcaggaaaaaaatgtcaatccttggaatatattagcg
atcacgtttaccaataaagcagctaaagagatgaaagagcgtgtcagtcgcttgattcgt
gatggtgggagtgaagtatgggtttcaacttttcactcaatgtgtgtacgaatcttgcgc
cgtgacatcgatcgtatcggttatacgcgttcatttacgatcagcgatccaggagaacaa
caaacgttaatgaaacgaattctgaaagagcgtgacattgatcccaagaaattcaaccct
agagctattcttgctgagatcagtaatgcaaaaaatgaattgctgacagcagaacaatac
agagacacagcaacttcttattttcaacgtattgtggcagactgctatgatgattatcaa
agagagttgcgccgtaaccaagcagtcgattttgacgacttaatcatgctaacagctcgt
ttatttaaagagagtcctgaaacgcttcagcattaccaagcgaaatttcagtatattcat
gtggatgagtatcaagataccaaccatgctcaatatacgttggtccaattattagcagac
cgattcagaaatatttgtgtcgtaggggatgctgaccaaagtatttatggatggcgcgga
gccgatatggaaaacatcttgaactttgaaaaagactattcggatgcaaaagtggtatta
ttggaacaaaactatcgttccactaaatacattctgcaagccgcaaatgatgttattggc
aacaatgccaatcgaaaagacaagaagttatggacagacaaccacgagggagaaaaaatt
tcttactaccgtgctcaaagtgaaggcgatgagtctcgttacgttgtttcaaagatccaa
gaagaaatgaaagaaaatggtctgggttatgggcatttcgctgtactttaccgaacaaat
gctcaatcgcgtaagattgaagaaagtctattgcaatcgaatatcccgtacaaaatggtt
ggcggtcacaaattctacgatcgtaaagaaatcaaagacgttttagcttatttgcgtctt
gtggcgaatccggacgacaatatgagtttcgagcgtgttgtaaatgtacctaaacgtgga
atcggcccgggaacggtagaaaaattgagggcttttgcgaatcaatacgattggtcatta
ttggaagctgcacaaaacgtagctttaacgagtattacgggaaaagcttctaaggcatta
gaaggttttggtcatatgctgaaagacttgcagaaaatgcaagagtacttgcctgtgaca
gaattggtagaagagttactgaaacgcagcggatataaggaatccttagaactggaaaaa
agtttagagtcagaatctcgcttagaaaatatccaagaattcttatctgttacacaacag
tttgaaaaggacaatgcaggaggagaaacggatctattgactttcttgacagatctgtct
cttgtatctgacttagacaacttagaagtagaaaatggtgaagtgactttaatgacgctt
catgcagcaaaagggttagagttcccggttgttttcctgataggaatggaagaaggaatt
ttcccgctttctcgtgccatgatggaagaaaacgaactggaagaagagcgtcgtttagcg
tatgtaggaattactagagctgaacggaaattgtatttgacaaatgcctactctcgagtg
ttgtatggacgtacgcaagctaatacaccttcacgtttcatacaagagatcagcgatgat
gtaatggatcttatgcacagagaaacgacgtctgttccatttagaagcaacgcaccattt
atcaataaagaaaaacgtgcgagcagtacgccgtatccaactcaagcgccagtttccagc
aaagtcagcagtggagcagataaagttgaatggaacgtcggcgataaagctacgcataaa
aaatggggcgtaggtacagtagtcaaacttactggtaatgctgataatttacagttggat
atcgcatttccagctccgacaggtattaaacgtctattggcagctttcgctccaatcgaa
aaggtttaa
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