Diaphorobacter sp. JS3051: I3K84_05945
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Entry
I3K84_05945 CDS
T11034
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dis Diaphorobacter sp. JS3051
Brite
KEGG Orthology (KO) [BR:
dis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dis03032
]
I3K84_05945
03036 Chromosome and associated proteins [BR:
dis03036
]
I3K84_05945
03400 DNA repair and recombination proteins [BR:
dis03400
]
I3K84_05945
DNA replication proteins [BR:
dis03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I3K84_05945
Chromosome and associated proteins [BR:
dis03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
I3K84_05945
DNA repair and recombination proteins [BR:
dis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
I3K84_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QPN32155
LinkDB
All DBs
Position
1261613..1261924
Genome browser
AA seq
103 aa
AA seq
DB search
MTRSDLVEELAARFGQLTQRDAEYAVKTILDAVSDALVRGHRIEIRGFGSFSVNRRPPRM
GRNPRSGEAVHIPEKRVPHFKPGKALRETVDQRTAELQGVQAQ
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatctgacctcgtcgaagaactggctgcccgctttgggcagctcacccagcgc
gacgccgaatacgccgtcaagaccattctggacgccgtgagcgatgcactggtgcgcggg
caccgcatcgagatccgcggctttggcagcttctcggtcaaccgccgccccccgcgcatg
ggccgcaatccgcgcagcggcgaggcggtgcatatccccgaaaagcgcgttccccacttc
aagcccggcaaggccctgcgcgaaactgtggaccagcgcaccgctgaactgcagggcgtg
caggcgcaataa
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integrated database retrieval system
