Diaphorobacter sp. JS3051: I3K84_16440
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Entry
I3K84_16440 CDS
T11034
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dis Diaphorobacter sp. JS3051
Pathway
dis02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I3K84_16440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dis02022
]
I3K84_16440
02035 Bacterial motility proteins [BR:
dis02035
]
I3K84_16440
Two-component system [BR:
dis02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
I3K84_16440
Bacterial motility proteins [BR:
dis02035
]
Pilus system
Twitching motility proteins
I3K84_16440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
PDE8A_N
HTH_23
HTH_28
AAA
HTH_30
AAA_16
Sigma70_r4
HTH_24
AAA_2
VpsR
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
QPN30368
LinkDB
All DBs
Position
complement(3458963..3460471)
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AA seq
502 aa
AA seq
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MNASTASILVVDDEPDLRTLYELTLLREGYRVETAASVDDARQQLQTQKFDVVITDMRLP
DGFGMDLLHDLRSQQRRERCVVMTAYGSAENAVEALRAGAFDYLTKPVDLKQFRAVVASA
VQGIGAVLAAPKATRPGARNVTQWPDMQDPVLDRLIGDSEAMRNVKQRIAKVARSMAPVL
VRGESGTGKELVARALHASSQRSEGPLIAVNCGAIPENLLEAEFFGARKGSYTGSTHDRE
GYFQAARGGTLFLDEIGDLPLPMQSKLLRAIQERTVRPLGSTQEEAVDVRIVSATHRDLA
ADVQAGRFRQDLYYRLNVIELLIPPLRERREDLPALCEALLARIEQESGVAVPRLTEEAL
RCIAQHPLTGNVRELENLLHRAVALSDGHELHVEGAPAPTVEAPPPLPQPVPSAPAIAQP
AEPHAPPRWSGISEGMPLPNDLQAWLDQQEREILVRALREAGFNRTATAARLGISLRQIR
YRIARLHIEVPQDGDSHGDAQP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatccaccgcctccattcttgtcgttgatgacgaacccgatctgcgcaccctc
tatgagctgaccctgctgcgtgaaggctaccgcgtggagaccgccgccagcgtggacgac
gcgcgccaacagctgcagacgcagaagttcgacgtcgtgatcaccgacatgcggctgccc
gacggcttcggcatggacttgctgcacgacctgcgcagccagcagcggcgtgaacgctgc
gtggtcatgacggcctatggatcggccgagaacgcggtggaggcgctgcgcgcgggcgcg
ttcgactacctgaccaagcccgtggacctgaagcaattccgtgccgtggtggcctcggcg
gtgcagggtattggcgccgtactggcggcgcccaaagccacccgccccggcgcacgcaat
gtcacgcagtggccggacatgcaagatcctgtgctggatcgcctgatcggcgactccgaa
gccatgcgcaatgtgaagcagcgcatcgccaaggtggcgcgcagcatggcccccgtgctg
gtgcgtggcgagtcaggcacgggcaaggaactggtggcccgcgcgctgcacgccagcagc
cagcgctccgaaggcccgctgatcgccgtcaactgcggcgcgattcccgagaacctgctg
gaggcagagttctttggcgcgcgcaagggttcctacaccggctctacgcacgaccgggag
ggctacttccaggccgcccgtggaggcacgctgttccttgacgaaattggcgacctgccg
ctgcccatgcaatccaaactgctgcgtgcgatccaggagcgcacggtacggcccctgggc
tccacgcaggaagaggccgtggacgtgcgcatcgtcagcgccacgcaccgagacctggcc
gccgacgtgcaggcggggcgcttccgccaggatctgtattaccggctgaatgtcatcgaa
ctgctgatcccaccgttgcgcgagcggcgagaggacctgcccgcgctgtgcgaggccttg
ctggcccgtatcgagcaagagtcgggggtggccgttccccgcctgacggaagaagcgctg
cggtgcatcgcacagcacccgctcaccggcaatgtgcgcgagctggaaaacctgctgcat
cgcgcggtagccctcagcgatggccatgagctgcacgttgaaggcgcgccagcccccacc
gtggaggcaccgccacccctaccgcagcccgtaccgtccgcaccagccatcgcgcagcct
gctgagccgcacgcgccccctcgttggtccggcatcagcgaaggcatgcccctgcccaac
gatctgcaagcctggctcgaccagcaggaacgggaaatactcgtgcgcgccctgcgcgag
gcgggtttcaaccgcacggccaccgcagcccgcctgggcatcagcctgcgccagatccgt
taccggattgcccggctgcacatcgaggtaccgcaagacggcgacagccatggcgacgcg
cagccctga
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