KEGG   Dietzia sp. oral taxon 368: C3V38_01270
Entry
C3V38_01270       CDS       T05390                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
dit  Dietzia sp. oral taxon 368
Pathway
dit03420  Nucleotide excision repair
dit03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C3V38_01270
   03430 Mismatch repair
    C3V38_01270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dit03400]
    C3V38_01270
Enzymes [BR:dit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C3V38_01270
DNA repair and recombination proteins [BR:dit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C3V38_01270
   MMR (mismatch excision repair)
    Other MMR factors
     C3V38_01270
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11 DUF6274 AAA_22
Other DBs
NCBI-ProteinID: AVM63238
UniProt: A0A2S0LSP7
LinkDB
Position
complement(258238..260691)
AA seq 817 aa
MTDTASAPARQHSPHSAHSALLDGLNPQQAAAVTHRGGPLLIVAGAGSGKTSVLTRRIAY
LLAEGGAHPGQILAITFTNKAAAEMRERVAALVGPHAERMWVATFHSICVRILRAQSALL
GTRNSNFTIYDSDDSRRLLGMIAKEQQLEVKKFTPRMLASAISSHKNELRDPAEAMDRAL
EDSDRTAQTVAAVFTEYQARLQAANAFDFDDLIGETVALLRAHPEVAAYYRRRFRHVMVD
EYQDTNHAQYVLVRTLVGGTASDDDEVGVPPAELCVVGDADQSIYAFRGATIRNIEDFEH
DYPDARSILLEQNYRSTQTILSAANAVIARNAGRREKNLWTAEGAGELLVGYVADNEHDE
ARFIAGEIDRLVDAGEASYSDVAVFYRTNNSSRVIEDVFVRLGLPYKVVGGTRFYERKEV
RDVVAYLKVLNNPDDAVAIRRILNTPRRGIGDRAEACVVVHAEQRGIGFAQALRDAAEGK
VSLLPSRSVKAIAGFVEMLDDLRGRLDGDDHAGGHDSAPDVGALVEAVLERTGYRAELEA
SNDPQDAARLDNLNELVGVGREFSSEAALQRSAREQGFVEEADADPDLDEGLAEPGSLAA
FLERVSLVADADEIPDDDQGQVTLMTLHTAKGLEFPVVFLIGMEDGLFPHMRALGDPAEL
SEERRLAYVGITRARRRLYLTRAMMRSSWGQPMTNPGSRFLEEIPSEAIEWQREEPAGGA
GFGDDDSYAPRRRFGGSSGGFSSGGGSGGRSPGIPRAKPSAPALELAPGDRVTHDKYGLG
KVLSCDGSGPRATATIDFGASGKVRLMLIGGVPMQKL
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgaccgacaccgcctccgcccccgcccgccagcactcgccccactcagcccactcagcc
ctccttgacgggctcaacccgcagcaggccgccgcggtcacccaccgcggcggcccgctg
ctgatcgtcgcgggcgcggggtcgggcaagaccagcgtgctcacgcggcggatcgcctac
ctgctggccgagggcggtgcgcacccggggcagatcctggccatcacgttcaccaacaag
gccgcggcggagatgcgggagcgcgtcgcggcgctggtcggcccgcacgccgagcggatg
tgggtggccaccttccactcgatctgcgtgcgcatcctccgggcccagtccgcgctgctc
gggacccgcaactcgaacttcacgatctacgactcggacgattcccggcgtctgctgggg
atgatcgccaaggagcagcagctcgaggtcaagaagttcaccccgcgcatgctcgcctcg
gccatctccagccacaagaacgagctgcgcgacccggctgaggccatggaccgggcgctc
gaggactcggaccgcaccgcgcagaccgtggccgccgtgttcaccgagtaccaggcgcgg
ctgcaggcggccaacgcgttcgatttcgacgatctcatcggtgagaccgtcgccctgtta
cgcgcgcacccggaggtcgccgcgtactaccggcggcggttccgccacgtcatggtggac
gagtaccaggacaccaaccacgcgcagtacgtcctggtccgcaccctcgtgggcggcacg
gcgtccgacgacgacgaggtgggcgtccccccggccgaactctgtgtggtgggtgacgcg
gatcagtcgatctacgcgttccgcggggccacgatccggaacatcgaggacttcgagcac
gactaccccgacgcccggtccatcctgttggagcagaactaccgctccacccagaccatc
ctctcggccgccaacgccgtgatcgcgcggaacgccgggcggcgcgagaagaacctgtgg
accgccgagggcgccggcgagctgctggtggggtacgtcgcggacaacgagcacgacgag
gcgaggttcatcgccggggagatcgaccgcttggtggacgcgggggaggcttcgtactcc
gacgtcgcggtgttctaccggaccaacaactcctcacgcgtgatcgaggacgtgttcgtc
cgcctcggcctgccgtacaaggtcgtcggcggtacgcgcttctacgagcgtaaggaggtg
cgcgacgtggtcgcctacctcaaggtgctgaacaacccggacgacgcggtggcgatccgg
cgtatcctcaacaccccgcggcgcggaatcggcgaccgggccgaggcgtgcgtcgtggtc
cacgccgagcagcgcgggatcggtttcgcgcaggccttgcgcgacgcggcggaggggaag
gtctcgctgctgccttcgcgttcggtcaaggcgatcgccgggttcgtcgagatgctcgac
gacctgcgcgggcgcctcgacggcgacgaccacgccggcgggcacgactccgcgcccgac
gtgggcgcgctcgtggaggcggtactcgagcgcaccggctaccgcgccgagctggaggcg
tccaacgatccgcaggacgcggcgcgactcgacaacctcaacgagctggtgggcgtgggg
cgggagttctcgtccgaggcggcgctccaacgctccgcccgcgagcagggcttcgtggag
gaggccgacgcggacccggacctggacgaggggctggccgagccggggtcgctggcggcg
ttcctggagcgcgtgtcgctggtggccgacgcggacgagatccccgacgacgatcagggg
caggtcacactcatgaccctgcacaccgcaaagggcctggagttcccggtggtgttcctc
atcggtatggaggacggactgttcccgcacatgcgggcgctgggcgatccagcggagctg
tccgaggagcggcggctggcctacgtcggcatcacccgcgcccggcggcgtctgtacctg
acgcgggccatgatgcgctcgtcgtggggccagcccatgaccaacccggggtcgcggttc
ctggaggagatcccctccgaggcgatcgagtggcagcgggaggagcccgccggcggggcc
gggttcggggacgacgactcgtacgccccgcggcggcgcttcggcggcagctccggtgga
ttcagttccggcggcggctccggtggacggtcgcccgggatcccgcgcgcgaagccgtcc
gcgcccgcgctggagttggcgccgggtgaccgggtcacgcacgataagtacggcctcggc
aaggtgctctcctgcgacggcagcggtccgcgcgccacggcgaccatcgacttcggtgcc
tccgggaaggtgcggctcatgctcatcgggggcgtccccatgcagaagctctga

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