Dietzia sp. oral taxon 368: C3V38_01495
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Entry
C3V38_01495 CDS
T05390
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dit
Dietzia sp. oral taxon 368
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dit03016
]
C3V38_01495
Enzymes [BR:
dit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
C3V38_01495
Transfer RNA biogenesis [BR:
dit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C3V38_01495
Prokaryotic type
C3V38_01495
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AVM63276
LinkDB
All DBs
Position
complement(309931..310818)
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AA seq
295 aa
AA seq
DB search
MSTRRIRLDVAYDGTDFSGWARQPGLRTVCGVLEAELGTVLRNPVTLTVAGRTDAGVHAR
AQVCHVDVDPAWLDQRSLDGRPEALVRRLARLLPADIAVMDARWVPDEFDARFSALRRHY
EYRLTTAPWGAEPTRARDTAAWTRTADLEAVRAASERLLGLHDFAAFCRRREGATTIREL
QRFEWRTEPDPRGADAPGATEVWTASVSADAFCWSMVRSLVGAVMAVGEGRRSLDWISGL
LAETERSSAVPVAPARGLSLIGVDYPADDELAARNLVTRELRPGPGGGAAGCCGG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccgccggatccgcctcgacgtcgcctatgacggcaccgacttctccgggtgg
gcgcgtcagcccgggctgcggacggtgtgcggggtgctcgaggccgaactcggcaccgtg
ctgcggaacccggtcacgctgaccgtcgcgggccggaccgacgccggggtgcacgcccgc
gcccaggtctgccacgtcgacgtggacccggcgtggctcgaccagcgctcgctggacggg
cgccctgaggcgctggtccggaggctcgcacggctgctgcccgcggacatcgccgtgatg
gacgcgcggtgggtgccggacgagttcgacgcccgcttctccgccctgcgccgtcactac
gagtaccgcctcaccaccgcgccgtggggcgccgaacccacccgcgcccgcgacacggcg
gcgtggacccgcaccgcggacctcgaggcggtgcgcgcggcctcggagcggctgctgggc
ctgcacgacttcgccgcgttctgccgccgccgcgagggtgccaccaccatccgggagctg
cagcgcttcgagtggcggaccgagccggatccgcgcggtgcggacgcgcccggtgcgacc
gaggtgtggacggcgtcggtcagcgcggacgcgttctgctggtcgatggtgcgcagcctc
gtgggcgccgtgatggccgtgggggagggccggcgcagcctcgactggatcagcgggctg
ctggcggagaccgagcggtcctccgcggtgcccgtggcgcccgcgcgcgggttgtcgctg
atcggggtcgactacccggcggacgacgagctcgccgcgcggaacctcgtcacgcgcgag
ctgcggccgggcccgggcggcggcgcggcggggtgctgcgggggatag
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