Dietzia sp. oral taxon 368: C3V38_01895
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Entry
C3V38_01895 CDS
T05390
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dit
Dietzia sp. oral taxon 368
Pathway
dit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C3V38_01895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dit03021
]
C3V38_01895
03400 DNA repair and recombination proteins [BR:
dit03400
]
C3V38_01895
Enzymes [BR:
dit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C3V38_01895
Transcription machinery [BR:
dit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C3V38_01895
DNA repair and recombination proteins [BR:
dit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C3V38_01895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AVM63348
UniProt:
A0A2S0LT16
LinkDB
All DBs
Position
complement(388341..392300)
Genome browser
AA seq
1319 aa
AA seq
DB search
MQDVNYFDELVISLATAEDIRNWSYGEVKKPETINYRTLKPEKEGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLDKIIYFAAYVITGVDTELRHNELSTLEAQFLEERKIIEDERDSDIEARARKLEAD
LAELEAEGAKADQRRKVKDGGEKEMKKIREAAQRELDRLEEIWNTFVKLDVNQIIADEGI
YRELEDRFGEYFEGGMGAEAIQQLLLNFDLEAEAESLREIIRNGKGQKKIRALKRLKVVS
AFLQSGNHPAAMVLGAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLQLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
DQVWDVLEEVIAEHPVMLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGRPLAMPRLDMVTGLYYLTRLDEGAEGAYE
PATDDAPATGVYATPAEAIMAVDLGVLDIHAPIRVRMTQQRPSAEIEAEQFPEGWTPGQE
WLAETTLGRVMFNELLPADYPFVNEQMPKKRQAVIINDLAERYPMIVVAQTVDKLKDTGF
YWATRSGVTIAMSDVLVPPAKKEILASYDTKAARLESQYDLGKITDEERKSDLVKLWQEA
TDEIGQAMEANYPDDNPIPTIVKSGAAGNMTQIRSLAGMKGLVTRPNGEFIPQPIKSSFR
EGLTVLEYFMNTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCGTSKGVETTI
ARPIMDAQGNSTGVLERDEHVETSTFARTLAEDAVDANGTVIVSAGTDLGDPTIEALISA
GVEKVKVRSVLTCTTGTGVCATCYGRSMATGQLVDIGEAVGIVAAQSIGEPGTQLTMRTF
HQGGVGDDITGGLPRVQELFEARVPKGKAPIAEEAGRIRIDEEERFYTITIVPDNGADEI
VYEKLSKRQGLAHITLDDGSSRPIADGDHLERGQALLEGPADPHEVLAILGPNGVQKHLV
DEVQKVYRSQGVSIHDKHIEVIVRQMMRRVAINESNSTEFLPGALVERAELTAENRRVLT
EGGSPASARPVLMGITKASLATDSWLSAASFQETTRVLTDAAINKRSDRLVGLKENVIIG
KLIPAGTGINRYRNSTVEPTEEARAAAYSIPDYGDGFYGPEDGFGDATGASVRLDDLGY
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacgtcaactacttcgacgagctggtcatcagcctcgcgaccgccgaggacatc
cgtaactggtcctacggcgaggtcaagaagccggagaccatcaactaccgcaccctcaag
ccggagaaggagggcctgttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcgtatgggccacatcgagctggccgcgccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgtctgggttacctcctggacctc
gcgcccaaggacctcgacaagatcatctacttcgccgcctacgtcatcacgggcgtcgac
accgagctgcgtcacaacgagctcagcaccctcgaggcgcagttcctcgaggagcgcaag
atcatcgaggacgagcgcgactccgacatcgaggcccgcgcgcgcaagctcgaggccgac
ctcgccgagctcgaggccgagggtgccaaggccgaccagcgccgcaaggtcaaggacggc
ggcgagaaggagatgaagaagatccgcgaggccgcccagcgtgagctggaccgcctcgag
gagatctggaacaccttcgtcaagctcgacgtcaaccagatcatcgccgacgagggcatc
taccgcgagctcgaggaccgcttcggcgagtacttcgagggcggcatgggtgccgaggcg
atccagcagctgctgctgaactttgacctcgaggccgaggccgagtcgctgcgcgagatc
atccgcaacggcaaggggcagaagaagatccgcgccctcaagcggctcaaggtcgtctcc
gcattcctgcagtcgggcaaccacccggcagccatggtgctcggcgccgtcccggtgatc
ccgccggagctgcggccgatggtccagctcgacggtggccgcttcgccacgtcggacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgactgatggacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgcttcaggagtccgtcgacgcg
ctgttcgacaacggtcgccgcgggcggcccgtcacggggccgggcaaccgcccgctcaag
tccctgtcggacctgctcaagggcaagcagggccggttccgtcagaacctcctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcaactccagctacaccag
tgcggtctgcccaagctgatggcgctcgagctgttcaagccgttcgtcatgaagcggctc
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcgcatggtcgagcgtcagcgc
gatcaggtgtgggacgtgctcgaagaggtcatcgccgagcacccggtgatgctcaaccgc
gctccgaccctgcaccgcctgggtatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctgcacccgctcgtgtgtgaggccttcaacgccgacttcgacggcgaccag
atggccgtgcacctcccgctgtccgcggaggcgcaggccgaggcgcgcatcctcatgctc
gcgtcgaacaacatcctgtcgccggcgtcgggtcgtccgctcgccatgccgcgtctggac
atggtcacgggcctctactacctgacccgtctggacgagggcgccgagggcgcctacgag
cccgccaccgacgacgcgccggcgaccggcgtgtacgcgaccccggccgaggccatcatg
gccgtcgacctgggtgtgctcgacatccacgccccgatccgggtccggatgacgcagcag
cgccccagcgccgagatcgaggcggagcagttccccgagggctggacccccgggcaggag
tggctggccgagaccacgctcggccgcgtcatgttcaacgagctgctcccggcggactac
ccgttcgtcaacgagcagatgccgaagaagcgtcaggccgtcatcatcaacgacctagcc
gagcgctacccgatgatcgtcgtggcgcagacggtggacaagctcaaggacaccggcttc
tactgggccacccggtcgggtgtcaccatcgccatgtccgacgtgctcgtgccgccggcc
aagaaggaaatcctcgcctcgtacgacaccaaggccgcgcgcctcgagtcgcagtacgac
ctcggcaagatcaccgacgaggagcgcaagagcgacctggtcaagctctggcaggaggcc
accgacgagatcggccaggccatggaggccaactacccggacgacaacccgatcccgacg
atcgtgaagtcgggcgcggcgggcaatatgacccagatccggtcgctggccggcatgaag
ggcctggtgacccgtccgaacggcgagttcatcccgcagcccatcaagtcctcgttccgc
gagggcctgacggtgctcgagtacttcatgaacacgcacggtgcgcgtaagggtctggcc
gacaccgccctgcgtaccgccgactcgggctacctcacccgtcgtctggtcgacgtctcc
caggacgtcatcgtccgcgagaccgactgtggcaccagcaagggcgtggagacgaccatc
gcccgtccgatcatggacgcccagggcaactccacgggtgtcctcgagcgcgacgagcac
gtcgagacctcgacgttcgcccggacgctcgccgaggacgcggtcgacgccaacggcacg
gtcatcgtgtcggcgggcacagacctgggcgacccgaccatcgaggcgctcatcagcgcc
ggcgtggagaaggtcaaggtgcgctcggtcctgacctgcaccaccggcaccggcgtctgc
gccacctgctacggccgctcgatggcgaccggtcagctggtggacatcggcgaggccgtc
ggcatcgtcgccgcccagtcgatcggtgagcccggtacccagctcacgatgcgtacgttc
caccagggtggcgtcggcgacgacatcaccggtggtctgccacgtgtgcaggagctgttc
gaggcgcgcgtgcccaagggcaaggcgccgatcgccgaggaggcgggccggatccgcatc
gacgaggaggagcgcttctacacgatcacgatcgtgcccgacaacggggcggacgagatc
gtctacgagaagctctccaagcgtcagggtctcgctcacatcaccctcgacgacggctcc
tcgcggccgatcgccgacggcgaccatctcgagcgcggtcaggcgctcctcgagggcccg
gcggacccgcacgaggtgctggcgatcctcggcccgaacggtgtccagaagcacctcgtc
gacgaggtgcagaaggtctaccgctcgcagggcgtgtcgatccacgacaagcacatcgag
gtcatcgtccgccagatgatgcgccgcgtcgcgatcaacgagtcgaacagcaccgagttc
ctgccgggtgccctggtggagcgtgccgagctcacggcggagaaccgccgcgtgctcacc
gagggtggttcgccggcctcggcgcgcccggtcctcatgggcatcaccaaggcctcgctc
gccaccgactcgtggctctcggcggcctccttccaggagaccacccgcgtcctcaccgac
gccgcgatcaacaagcggtcggaccggctcgtgggcctcaaggagaacgtcatcatcggt
aagctcatcccggcgggtaccggtatcaaccgctaccggaactcgacggtcgagcccacc
gaggaggcccgcgccgccgcctactccatcccggactacggcgacggcttctacggcccc
gaggacggtttcggcgacgccaccggcgcgtccgtccgcctcgacgacctgggctactga
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