KEGG   Dietzia sp. oral taxon 368: C3V38_02730
Entry
C3V38_02730       CDS       T05390                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
dit  Dietzia sp. oral taxon 368
Pathway
dit03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    C3V38_02730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dit03400]
    C3V38_02730
DNA repair and recombination proteins [BR:dit03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     C3V38_02730
SSDB
Motif
Pfam: Ku HC2
Other DBs
NCBI-ProteinID: AVM63477
LinkDB
Position
complement(546436..547542)
AA seq 368 aa
MRSIWKGEVSFGLVNVPVKVYAATEDHDLHARQVDKKDGVRIRYKKVRDDNGEEVEFSDI
AKAYESEEGEMVILTKEDLASLPVEQNHEIEVTEFVPADQVDPVAFDNAYFLEPASRSNR
AYVLMREALQQTDRLAICTFTLRNRTRLCALRVYKDVLMLQTLLWPDEIRPAILEGLDKE
AKVRPQEVKMAASLIETMAADFEPEKYEDDYQNQLKELIEAKAAGGEAFTVEEKESSDDD
GDDEVADLLAALRASVKDRGGKADDADDQDDDKGDDDEDSGSAKKATSKKSGSSSAKKTP
AKKTADKKAPAKKAAAEKSTAKKSMSSKSDSGSSGSNTAKKSTASKSTAKKAPAKKSTAR
KTPAKKSA
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcgatccatctggaagggcgaggtctcgttcggtctggtcaacgtgccggtcaaggtg
tacgcggcgaccgaggaccacgatctgcacgcgcggcaggtggacaagaaggacggcgtc
cgcatccgctacaagaaggttcgggacgacaacggcgaggaggtcgagttctccgacatc
gccaaggcgtacgagtccgaagagggtgagatggtcatcctcaccaaggaggacctcgcc
agcctgccggtggagcagaaccacgagatcgaggtgacggagttcgtcccggcggatcag
gtggacccggtggcgttcgacaacgcgtacttcctggagccggcgtcgcgctccaaccgg
gcgtacgtgctgatgcgcgaggcgctgcaacagacggaccgcctcgccatctgcacgttc
acgctgcgcaaccgcactcgcctctgcgccctgcgggtgtacaaggacgtgctcatgctg
cagacgctgctgtggcccgacgagatccgcccggcgatcctggaggggttggacaaggag
gccaaggtccggccgcaggaggtcaagatggcggcgtcgctcatcgagactatggcggcg
gacttcgagccggagaaatacgaggacgattaccagaatcagctcaaggagttgatcgag
gccaaggcggccggcggtgaggcgttcacggtggaggagaaggagtcgtcggacgatgac
ggcgacgacgaggtggccgatctgctcgcggcgctgcgggcgagtgtgaaggaccggggc
ggtaaggcggacgacgccgacgaccaggacgacgacaagggcgacgacgacgaggactcc
ggctccgccaagaaggccaccagcaagaagagcgggagcagctcggcaaagaagaccccg
gccaagaagactgcggacaagaaggcgccggccaaaaaggccgcggccgagaagtcgact
gccaagaagtcgatgtcttcgaagtcggactccggcagctccggctcaaacacggccaag
aagtcgacagcctcaaagtccacggccaagaaggccccggcgaagaagtcgacggcccgc
aagacgccggccaagaagtcggcttga

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