Dietzia sp. oral taxon 368: C3V38_08285
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Entry
C3V38_08285 CDS
T05390
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
dit
Dietzia sp. oral taxon 368
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dit03400
]
C3V38_08285
DNA repair and recombination proteins [BR:
dit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
C3V38_08285
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
AVM65836
LinkDB
All DBs
Position
complement(1768217..1768687)
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AA seq
156 aa
AA seq
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MAPEPGHSHPRTGRPAASSETVRANMARQKRRDTGCEMAVRRLLHAAGIRYRVDFRPLPD
QRFRVDIGWRNRKLAVFIDGCFWHGCPDHGTLPKNNREWWSDKLRANAQRDRRTDELLRA
RGWTVLRYWEHEDPDHVASTIRKHLMQRAASGGDPT
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagaacccggacactcccacccgcggaccgggcgcccggccgcctcttcggaa
actgtcagagccaacatggctcggcagaagcgacgcgataccgggtgtgagatggcggtt
cgacgactgcttcacgccgccgggatccgataccgggtcgatttccgccccttgcctgat
cagcgtttccgagtggacatcgggtggaggaatcggaagctggcggtcttcatcgatggc
tgcttctggcacggttgccccgaccacgggaccctgcccaagaacaacagggaatggtgg
tccgacaagcttcgcgcgaatgcccagcgggacaggcggactgacgagctgctccgcgcc
aggggttggaccgttctccgctactgggaacacgaggacccggaccacgtcgcctcgact
atccgaaagcacctgatgcaacgagccgcctcaggtggcgacccgacttag
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