Dietzia sp. oral taxon 368: C3V38_08685
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Entry
C3V38_08685 CDS
T05390
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dit
Dietzia sp. oral taxon 368
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dit03032
]
C3V38_08685 (topA)
03400 DNA repair and recombination proteins [BR:
dit03400
]
C3V38_08685 (topA)
Enzymes [BR:
dit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C3V38_08685 (topA)
DNA replication proteins [BR:
dit03032
]
Prokaryotic type
DNA Topoisomerases
C3V38_08685 (topA)
DNA repair and recombination proteins [BR:
dit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C3V38_08685 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
BAF1_ABF1
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
AVM64452
UniProt:
A0A2S0LW28
LinkDB
All DBs
Position
1851316..1854315
Genome browser
AA seq
999 aa
AA seq
DB search
MASKKTASGGKRSLVIVESATKARKIQPYLGSDYVVEASVGHIRDLPKGAADIPAKYKKE
PWARLGVNPEDDFEPIYVVSADKKKKVSELKKELAGVDQLLLATDPDREGEAIAWHLLEV
LKPKVPVKRMVFHEITKPAILAAAENTRELDTDLVDAQETRRILDRLYGYEVSPVLWKKV
MPRLSAGRVQSVATRVIVERERERMAFVAADYWDITATLATQRSAGGDAGEPRSFTAKLS
AVDGARVAQGRDFGPDGRLKTTGAAKDSVVLDEPAARALAGALDGADFVVDTVESKPYTR
RPYAPFMTSTLQQEAGRKLRYTSERTMRIAQRLYENGYITYMRTDSTTLSEGGIAAARAQ
ATELYGSEYVSPTPRQYTRKVKNSQEAHEAIRPAGESFATPGQLHSVLDAEEYRLYELIW
QRTVASQMADARGTSVSIRISGQAGANASGYSRATFSASGRTITFPGFLKAYVEAADDAA
ESADKPMADDAERRLPQLSEGQHLTGSDLLPEGHTTSPPARYTEASLVKAMEEMGIGRPS
TYASIIRTIQDRGYVYSRGNALVPSWVAFAVVGLLEQNFGRLVDYDFTSLMEDELDAIAE
GRENRSDWLRRFYFGVGGPGGHGEGGEGDADSNYAVGLKNLVDVNLEAIDARSINSIRVF
DDAEGRPVYVRVGRYGPYLERMVTGESGEEESQRANLPEGMSPDELTLEVAEKLFATPQD
GRPLGVDPETGHEIVVKDGRYGPYVTEKLPEPSDAEKAAWAKKVLADAEAEKKRIDAERD
AAIAAAKDDEAKAEAKKAATKAKAAVTRKAKKDSENPTGPKPRTGSLMQSMDPATVTLEE
ALKLLSLPRVVGVDPASGEEITAQLGRYGPYLKKGTDSRTLESEDAVFTVTLEEALKIYS
EPKRRGRQAAAPKALREMGIDEVSGKQMLVKDGRFGPYVTDGETNASLRKGDTVESLTDA
RAAELLSERRAKSPPAKRAPATKSGARRAPAKKAASSRR
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagcaagaagacagcatcgggcggcaagcggagcctggtgatcgtcgagtccgcc
accaaggcgcgcaagatccagccctatctggggtccgactatgtggtcgaggcttccgtc
ggtcacatccgcgacctgcccaagggcgccgcggacatcccggccaagtacaagaaggag
ccgtgggcgcggctgggcgtgaacccggaggacgacttcgagcccatctacgtggtcagc
gccgacaagaagaagaaggtctccgagctcaagaaggagctcgcgggggtggatcagctc
ctgctggcgacggaccccgaccgcgagggtgaggcgatcgcctggcatctcctcgaggtg
ctcaagcccaaggtccccgtcaagcgcatggtgttccacgagatcaccaagcccgccatc
ctcgccgccgccgagaacacccgcgagctggacaccgacctcgtcgacgcccaggagacc
cgccgcatcctcgaccgtctctacggatacgaggtctcgcccgtgctgtggaagaaggtc
atgccgcggctgtccgccgggcgtgtgcagtcggtggccacccgcgtcatcgtcgagcgc
gagcgcgagcgcatggcgttcgtcgccgccgactactgggacatcaccgcaaccctggcg
acgcagcgctcggccggaggtgacgccggtgagccacgcagcttcacggccaagctctcc
gccgtcgatggcgcccgggtggcgcagggccgtgacttcggcccggacggcaggctgaag
accaccggcgcagccaaggactccgtcgtgctcgacgagcccgcggcccgcgcgctggcc
ggggctctcgacggtgccgacttcgtcgtcgacaccgtcgagtccaagccctacacacgg
cgcccctacgcgccgttcatgacctcgaccctccaacaggaggccggccgcaagctccgg
tacacgtccgagcgcaccatgcgcatcgcgcagcggctgtacgagaacggctacatcacc
tacatgcgaacggactccaccaccctgtccgagggtggcatcgccgccgcccgggcgcag
gcgacggagctctacggcagcgagtacgtctcgcccacgccgcggcagtacacgcgcaag
gtcaagaactcgcaggaggcgcacgaggccatccgccccgccggtgagtcattcgccacc
cccggccagctgcacagcgtgctggacgcggaggagtaccgcctctacgagctgatctgg
cagcgcaccgtcgcctcccagatggccgacgcccgcggcacctcggtgagcatccgcatc
agcgggcaggccggggccaacgcctccggatactcccgcgccaccttctccgcctccggc
cgcaccatcacgttcccgggcttcctcaaggcctacgtcgaggccgccgacgatgccgcc
gagtccgccgacaagcccatggccgacgacgccgaacggcgcctgccgcagctgtccgag
ggacagcacctcaccggctcggacctcctgcccgagggccacaccaccagcccgccggcc
cgctacaccgaggccagcctcgtcaaggcgatggaggagatgggcatcggacgcccgtcg
acctacgccagcatcatccgcaccatccaggaccgcggctacgtctactcgcgcggcaac
gcgctcgtgcccagctgggtggcgttcgcggtggtcgggttgctcgagcagaacttcggc
cggctcgtcgactacgacttcacgtccctcatggaggacgagctcgacgcgatcgccgag
ggtcgggagaaccggagcgactggctgcgccgcttctacttcggcgtcggtggcccgggg
ggccacggcgaggggggtgagggcgacgcggactcgaactacgcggtggggctgaagaac
ctcgtcgacgtgaacctcgaggccatcgacgcccgcagcatcaactcgatccgcgtgttc
gacgacgccgaggggcgccccgtctacgtgcgcgtcggtcgctacggtccgtacctcgag
cggatggtgacgggcgagtccggagaagaggagtcgcagcgcgccaacctgcccgagggc
atgagccccgacgagctcaccctggaggtggccgagaagctcttcgccaccccgcaggac
gggcgtccgctgggcgtggaccccgagaccgggcacgagatcgtcgtcaaggacggacgc
tacgggccctacgtcacagagaagctgcccgagccgagcgacgccgagaaggccgcgtgg
gcgaagaaggtgctcgccgacgccgaggcggagaagaagcggatcgacgccgagcgcgac
gccgcgatcgccgcggcgaaggacgacgaggccaaggcggaggccaagaaggccgccacg
aaggccaaggccgcggtcacgcgcaaggcgaagaaggactccgagaacccgaccgggccc
aagccgcggaccgggtcgctcatgcagtccatggatccggcgacggtcacgttggaggag
gcgctcaaactcctgtcactgccccgcgtcgtcggtgtcgaccccgccagcggcgaggag
atcaccgcacagctcggccggtacgggccgtacctgaagaagggcaccgactcgcgcacc
ctcgagtccgaggacgcggtgttcacggtgacgctcgaggaggcgctgaagatctactcc
gagcccaagcgtcggggccgccaggccgctgcgcccaaggcactgcgcgagatggggatc
gacgaggtctccggcaagcagatgctggtcaaggacggccggttcggcccctatgtgacc
gacggcgagaccaacgcgtctctgcgcaagggtgacaccgtggagagtctcaccgatgcg
cgggccgccgagttgctctcggagcgtcgggccaagtcgccgccggccaagagggccccc
gccacgaagtcgggcgcccgtagagccccggcgaagaaggcggcctcctcccgtcgctga
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