Dietzia sp. oral taxon 368: C3V38_10010
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Entry
C3V38_10010 CDS
T05390
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dit
Dietzia sp. oral taxon 368
Pathway
dit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C3V38_10010
09124 Replication and repair
03420 Nucleotide excision repair
C3V38_10010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dit03021
]
C3V38_10010
03400 DNA repair and recombination proteins [BR:
dit03400
]
C3V38_10010
Enzymes [BR:
dit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3V38_10010
Transcription machinery [BR:
dit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
C3V38_10010
DNA repair and recombination proteins [BR:
dit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
C3V38_10010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVM64660
UniProt:
A0A2S0LWK7
LinkDB
All DBs
Position
complement(2143039..2144706)
Genome browser
AA seq
555 aa
AA seq
DB search
MSGGPLIVQSDKTVLLEIDHEQAADARQALAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDVLVSYSRFPVPQPLLVDIAETMARYGRLQLVKSPVHGLTLVSLDSAVLAEVK
RHKKIAPMLGADIDADTVIVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHEIALSTEEE
QWELRDYQQMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWK
RELLARTTLTEDEIGEYSGERKEIRPVTIATYQVVTRKTKGVHRALELFDSRDWGLMIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APADCIEVRVTLTENERMLYATAEAEDKYKLCSTARTKIPVVRKILARHAGAPTLVIGAY
LDQLEELGAELDAPVIQGSTSNKEREKLFDQFRNGEISTLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRI
VDADDLLGPPIPEVG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggtggaccgctgatcgtccagtcggacaagacagtgctgctggagatcgaccac
gagcaggccgccgacgcccgacaggcgctggcccccttcgccgagctcgagcgcgcgccc
gagcacgtccacacctaccggatcacgccgctggccctgtggaacgcccgggccgccggg
cacgacgccgagcaggtggtcgacgtcctggtctcctactcgcgcttccccgtgccgcaa
ccgctgctcgtggacatcgcggagaccatggcgcgctacggccggctgcagctggtcaag
agcccggtgcacggcctgacgctcgtctccctcgactccgccgtgctcgccgaggtcaag
cggcacaagaagatcgcccccatgctcggcgccgacatcgacgcggacacggtgatcgtg
cacccctccgagcgcggtcggctcaagcaggagctgctcaaggtgggctggcccgccgag
gacctcgccggctacgtggacggcgaggcccacgagatcgcgctgtccaccgaggaggag
cagtgggagctgcgcgactaccagcagatggccgccgactcgttctgggcgggcggctcc
ggcgtggtcgtgctgccctgcggcgccggcaagacgatggtcggcgcggccgcgatggcc
aaggccaaggccaccacgctcatcctggtgaccaacaccgtcgccgggcgccagtggaag
cgggaactgctggcccgcaccaccctcaccgaggacgagatcggcgagtactccggtgag
cgcaaggagatccggccagtcaccatcgccacataccaggtggtcacgcgcaagaccaag
ggcgtgcaccgggcgctggagctgttcgactcccgcgactggggcctgatgatctacgac
gaggtccacctgctgcccgcgcccgtgttccgcatgaccgccgacctgcagtcgcgccgc
cgcctcggcctgaccgcgacgctcgtgcgcgaggacggccgcgagggcgacgtgttctcc
ctcatcgggcccaagcgctacgacgccccgtggaaggacatcgaggcgcaggggtggatc
gcgcccgccgactgcatcgaggtgcgcgtgacgctcaccgagaacgagcggatgctgtac
gcgaccgccgaggccgaggacaagtacaagctgtgctcgaccgcccgcaccaagatcccg
gtggtcaggaagatcctcgcgcgccatgccggcgcccccaccctggtgatcggcgcctac
ctcgaccagctcgaggagctcggcgccgagctcgacgcgcccgtcatccaggggtcgacc
tccaacaaggagcgcgagaaactgttcgaccagttccgcaacggtgagatctccacgctc
gtggtgtccaaggtcgccaacttctcgatcgacctgcccgaggccagcgtcgcggtgcag
gtgtcgggcacgttcggctcgcgtcaggaggaggcgcagcggctcggtcgactgctgcgg
cccaagcacgacggcgggcaggcgcacttctactcggtcgtcgcccgcgacaccctcgac
gccgagtacgccgcgcaccgccagcggttcctcgccgagcaggggtacgcgtaccggatc
gtcgacgccgacgacctgctcggcccgcccatccccgaggtcggctga
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