Dietzia sp. oral taxon 368: C3V38_11190
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Entry
C3V38_11190 CDS
T05390
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
dit
Dietzia sp. oral taxon 368
Pathway
dit03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C3V38_11190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dit03019
]
C3V38_11190
03009 Ribosome biogenesis [BR:
dit03009
]
C3V38_11190
Messenger RNA biogenesis [BR:
dit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C3V38_11190
Ribosome biogenesis [BR:
dit03009
]
Eukaryotic type
Pre-60S particles
RNases
C3V38_11190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AVM64846
LinkDB
All DBs
Position
complement(2399823..2400491)
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AA seq
222 aa
AA seq
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MPESTSAETAAPSSSPTPHQESKNDRIVWIDCEMTGLDTTNDKLVEIAALVTDSDLNVLG
EGVDIVIHASDAALDAMVPVVRDMHASSGLTEEIRRSTVTVAEAEKAVLDYVRAWVPVAG
SAPLAGNSIGTDRGFLARDMPELNSYLHYRMIDVSSIKELCRRWYPRIYFGQPEKGMSHR
ALADIKESIRELQYYRATAFVPQPGPTSDEVKKAAAELPAVE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagtcgacctccgccgagaccgctgccccgtcgtcgtcaccgacgccccaccag
gaatccaagaacgaccgcatcgtctggatcgactgcgagatgaccggcctcgacaccacg
aacgacaagttggtggagatcgcggcgctggtcaccgactccgacctcaacgtgctgggc
gagggcgtcgacatcgtcatccacgcctccgacgccgcgctcgacgccatggtgccggtg
gtgcgggacatgcacgcctcctccggcctgaccgaggagatccgcaggtcgacggtgacg
gtggccgaagccgagaaggccgtcctggactacgtacgggcgtgggtgccggtggccggg
tccgctcccctggcgggcaactcgatcggcaccgaccgcggcttcctcgcccgcgatatg
cccgagctcaactcctacctgcactaccggatgatcgacgtcagctccatcaaggaactg
tgccgccggtggtacccccgcatctacttcggccagcccgagaagggcatgtcccaccgg
gccctggcggacatcaaggagtcgatccgcgagctgcagtactaccgggccaccgcgttc
gtcccgcagcccgggccgaccagcgacgaggtcaagaaggccgccgccgagctgcccgcg
gtcgagtag
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