Dietzia sp. oral taxon 368: C3V38_12030
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Entry
C3V38_12030 CDS
T05390
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dit
Dietzia sp. oral taxon 368
Pathway
dit03030
DNA replication
dit03430
Mismatch repair
dit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3V38_12030
03430 Mismatch repair
C3V38_12030
03440 Homologous recombination
C3V38_12030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dit03032
]
C3V38_12030
03400 DNA repair and recombination proteins [BR:
dit03400
]
C3V38_12030
Enzymes [BR:
dit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3V38_12030
DNA replication proteins [BR:
dit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3V38_12030
DNA repair and recombination proteins [BR:
dit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3V38_12030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AVM64983
LinkDB
All DBs
Position
complement(2581840..2583483)
Genome browser
AA seq
547 aa
AA seq
DB search
MSDPAATVSAMPPSTSPAPVGAQGAFDELEPLLSEVTFVVVDLETTGTKPGGDEITEIGA
VRIRGGEVQAELSTFVSIDGVLPGHISRLTGIAPEDLVGAPSLGEVMATFLEFSRGAVLV
AHNARFDLGFLRAAAAATGHRWPDPPSVCTLALARRVLHRGETRGHRLGVLAAHLGATVE
PNHRALQDARATVDVLHALISRVGDCGVSTLSELLAYDGRLAPEIRRRATLTEALTDGPG
VYVFRDEAGGPLYVGSSGSVRRRARSYYSGGDTRGRMRTMVGLAASVESVPCAHLLEAWT
VEEQLIDSLQPPFNRRSRSPRRGWWLSPPTGRASRPTIVRIPDDPTAIGPFRRTEDARAA
WEDLLEAFGGRPTPERWAALADGRDQAPLHALVEQIDRLAADGAFERGARLRDRTAALIR
VLARRQELAATAALAEIVLVQPAPRRAWAVAIVRHGRLAGSGTVPPGAAPMPVIDGLRAA
ATTVRPAPGPFAGATQAQIRNVHRWIDSTQTRIVSVDGCWTLPVQGAHTLTDWADRAERA
AADHRHA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccccgccgctaccgtctccgccatgcccccctccacctcaccggcacccgtc
ggcgcgcagggcgcgttcgacgagctcgagccgctgctgtccgaggtgaccttcgtcgtc
gtcgacctcgagaccaccggcaccaagccgggcggcgacgagatcaccgagatcggcgcc
gtccggatccggggaggcgaggtgcaggcggagctgtccaccttcgtctcgatcgacggc
gtactgccggggcacatcagcaggctgacggggatcgccccggaggacctcgtcggcgca
ccgtccctcggcgaggtgatggcgacgttcctcgagttctcgcgcggcgctgtcctggtg
gcacacaacgccagattcgacctcggcttcctccgcgccgccgcagccgcgacgggccac
cggtggccggatcccccgtccgtgtgcaccctcgcactcgcccggcgggtgctgcaccgc
ggcgagacgcgtggccaccggctcggggtcctggccgcacacctgggcgccacggtcgag
cccaatcaccgcgccctacaggacgcgcgcgccacggtggacgtgctgcacgccctcatc
tcgcgggtgggtgactgcggggtgtccaccctctccgaactgctggcgtacgacggccgc
ctggctcccgagatccgacgtcgcgcgaccctcaccgaggcgctcaccgacggccccggg
gtctacgtcttccgcgacgaggccggcgggccgctgtacgtcgggtcatccggctcggtg
cgtcgtcgcgcgcgctcctattactccggcggggacacccgcgggcggatgcgcaccatg
gtcggcctggccgcctcggtggagtcggtgccgtgcgcccacctcctcgaggcgtggacc
gtcgaggaacaactcatcgactcactgcagcccccgttcaacagacggtcccgcagccct
cgccgaggctggtggctctcccctcccaccggccgcgccagccgtccgacgatcgtccgg
atcccggacgaccccacggcgatcgggccgttccgtcgcaccgaggacgcacgcgccgcg
tgggaggacctcctcgaggcgttcggcggtcggcccacgcccgagcgctgggcggcgctc
gccgacgggcgggaccaggccccgctgcacgcgctcgtcgagcagatcgaccgactcgcc
gccgacggcgccttcgagcgcggggcgagactgcgtgacaggaccgccgccctcatccgg
gtactcgcccgccggcaggagctggccgccaccgccgcgctcgcggagatcgtgctcgtc
caaccggcgccccgacgggcctgggcggtggcgatcgtccgccacggccggctcgccgga
tccggcacggtcccacccggagccgcgccgatgccggtcatcgacggcctacgggccgcc
gcgaccaccgtgcggcccgcgcccgggccgttcgccggggcgacccaggctcagatccgg
aacgtccaccggtggatcgactccacgcagacccgcatcgtctcggtcgacggctgctgg
acgctccccgtccagggtgcgcacaccctgacggactgggctgaccgggccgaacgcgcg
gccgccgatcaccgccacgcctga
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