Dietzia sp. oral taxon 368: C3V38_12175
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Entry
C3V38_12175 CDS
T05390
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dit
Dietzia sp. oral taxon 368
Pathway
dit00470
D-Amino acid metabolism
dit00550
Peptidoglycan biosynthesis
dit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C3V38_12175 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C3V38_12175 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dit01011
]
C3V38_12175 (murD)
Enzymes [BR:
dit01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
C3V38_12175 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dit01011
]
Precursor biosynthesis
Amino acid ligase
C3V38_12175 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Toprim_C_rpt
Motif
Other DBs
NCBI-ProteinID:
AVM65011
UniProt:
A0A2S0LXL9
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All DBs
Position
2613243..2614829
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AA seq
528 aa
AA seq
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MTETTPTAGAAAGRDLDVRELAGTRVLVLGAGVSGPGAVRILDALGAEPVVADSRPEAIA
RLREALPDGVACEGVDLDRAAELLAAPRGPVGQAGGAAGAGGGDRIGIDLVVTSPGWRPD
SPLLVAAADAGICVWGDVELAWRADAAELFGPRRTWLAVTGTNGKTTTTSMLEAICLEAG
MAARACGNIGLPVTDVLLTEPRVEVLAAELSSFQLHWAPSCRPDVGVVLNVAEDHLDWHG
SMEAYAAAKAQVLTGRVAVAGADDEIAARLLADAPAATRIGVRIGAPAAGEYGVVDGVLT
ARVGAGGVGPGDGGDGGDEYDDDEVALLPAADVRPAGPAGVLDALAASAVAMSVGARAEH
VAAALRSFTVGAHRAEPVATIDGITYIDDSKATNPHAARTSLLAGGPMVWIAGGLLKGAD
VEPLVAEVADVLRGVVLIGRDRGRIAGALARHAPTVPVVELASGDDDDAAGPDEPQQTMD
RAVAEAARMATGGDTVLLAPAAASMDMFTDYGHRGRSFVLAVGRVAGR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgacggagacgaccccgacagccggcgcggccgccgggcgggacctcgacgtgcgcgag
ctcgccggcacgcgcgtgctcgtcctgggcgcgggcgtatccgggccgggcgctgtacgc
atcctcgacgcgctgggcgccgaaccagtggtcgccgactcgcgacccgaggcgatcgca
cgcctgcgggaggcgctgccggacggtgtcgcgtgcgagggcgtcgacctcgaccgcgcc
gccgagctgctggccgctccgcgcgggccggtcggccaggccggcggggccgccggggcc
ggcgggggtgaccggatcggtatcgacctggtcgtgaccagcccggggtggcgcccggac
tcgcccctgctggtcgccgctgcggacgccgggatctgcgtgtggggcgacgtggagctg
gcgtggcgcgccgacgccgccgagctgttcggcccccgccgcacgtggctcgcggtgacc
ggtaccaacggcaagaccaccaccacctcgatgctcgaggccatctgtctcgaggcgggc
atggcggcgcgagcgtgcgggaacatcggcctgccggtgaccgacgtgctgctgactgag
ccacgcgtggaggtgctcgcggccgagctgtcgagcttccagctgcactgggcgccgagc
tgccgaccggacgtgggcgtggtgctcaacgtcgccgaggaccacctcgactggcacggg
tccatggaggcctacgccgcggccaaggcgcaggtcctgaccggccgggtggccgtggcc
ggtgccgacgacgagatcgccgcgcgcctgctcgccgacgcgcccgccgcgacgcgtatc
ggggtgcgcatcggcgcgcccgccgcgggggagtacggcgtggtcgacggcgtgctcacc
gcgcgggtcggcgccgggggcgtcggtccgggcgacggcggcgacggtggcgacgagtat
gacgacgacgaggtggcgctgctgccggccgcggacgtgcgcccggccgggcccgcgggc
gtcctcgacgcactcgccgcctcggccgtggccatgtccgtgggcgcgcgggccgagcac
gtcgccgcggccctgcgttcgttcacggtgggcgcccatcgcgccgagccggtggcgacc
atcgacgggatcacctacatcgacgactccaaggccaccaatccgcacgccgcccgcacc
tcgctgctggcgggcggaccgatggtgtggatcgccggcggactgctcaagggcgccgac
gtcgagccgctggtcgccgaggtcgccgatgtcctgcgcggagtggtcctcatcggccgc
gaccgcgggcggatcgccggggcattggcccgacacgcgccgacggtgcccgtggtggag
ctggcctcgggagacgatgacgacgctgcgggtcccgacgagccgcagcagacgatggac
cgcgcggtcgccgaggccgcgcggatggccaccggaggcgacaccgtgttgctcgccccg
gctgccgcgtcgatggacatgttcaccgactacggccaccgggggcgcagcttcgtcctc
gccgtgggccgcgtggccgggaggtag
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