Dietzia sp. oral taxon 368: C3V38_13255
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Entry
C3V38_13255 CDS
T05390
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
dit
Dietzia sp. oral taxon 368
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C3V38_13255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dit03021
]
C3V38_13255
Transcription machinery [BR:
dit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C3V38_13255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AVM65975
LinkDB
All DBs
Position
complement(2838490..2839941)
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AA seq
483 aa
AA seq
DB search
MPDSHRVTGCEGAFVAATKTTSSDSAASGDPSGTEVTGEAPAKKTAARKAPAKKTAAKRT
AAKKAPAKKTAAKKTAAKKTAAKKTAAKKTASPAGADVVEDDQLDDVGDALEAEPDTSEL
EDVEVDVEDVEDEAADEEPKEEPKEEPSAKDKASGDFVWDEDESEALRQARKDAELTASA
DSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATWYMAQVTERGEKLTTAQRRDFKWIE
RDGVRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFST
YATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDI
TPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLRSVLD
TLSEREAGVVRLRFGLTDGLPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRD
YLD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atccccgattcccatcgagtaaccggttgtgaaggggcgtttgtggcagccacgaagacc
accagttcggattccgcggcgagcggcgatccgtcgggcaccgaggtcactggcgaggcc
cccgccaagaagaccgccgcgcgcaaggcgcccgcgaagaagacggcggccaagaggacc
gccgccaagaaggccccggcgaagaagaccgccgccaagaagaccgcggccaagaagacg
gccgccaagaagaccgccgccaagaagaccgcctcccccgccggcgccgacgtggtcgag
gacgaccagttggacgacgtcggggacgccctcgaggccgagcccgacacctccgaactg
gaggacgtcgaggtcgacgtggaggacgtcgaggacgaggcggccgacgaggagcccaag
gaggagcccaaggaggagcccagcgccaaggacaaggcgtcgggcgacttcgtctgggac
gaggacgagtccgaggcgctccgccaggcccgcaaggacgccgagctcaccgcctccgcc
gactccgtccgcgcctacctcaagcagatcggcaaggtcgccctcctcaacgccgaggag
gaggtcgagctcgccaagcgcatcgaggccggcctgtacgcaacctggtacatggcgcag
gtgaccgagcgcggcgagaagctcaccaccgcgcagcgtcgcgacttcaagtggatcgag
cgagacggcgtccgcgccaagaaccaccttctcgaggccaacctccgactcgtcgtgtcg
ctggccaagcgctacaccggccgcggcatggcgtttttggacctcatccaggagggcaac
ctcggcctcatccgcgcggtcgagaagttcgactacaccaagggctacaagttctccacg
tacgccacgtggtggatccgccaggccatcacccgcgccatggccgaccaggcccgcacc
atccgcatcccggtgcacatggtcgaggtcatcaacaagctcggccgcatccagcgcgag
ctgctccaggacctgggccgcgagcccaccccggaggagctggccaaggagatggacatc
accccggagaaggtgctggagatccagcaatacgcccgggagcccatctcgttggaccag
acgatcggcgacgagggcgacagccagctcggcgacttcatcgaggactccgaggccgtg
gtggccgtggacgcggtgagcttcacgctgctgcaggaccagctgcgctcggtcctcgac
acgctttccgagcgtgaggcgggcgtggtgcgactgcgcttcgggctcaccgacggcctg
ccgcgcaccctcgacgagatcggccaggtctacggggtcacccgtgagcgcatccggcag
atcgagtccaagaccatgtccaagctgcgccacccgtcgcgctcgcaggtcctgcgggac
tacctggactga
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