Dietzia sp. oral taxon 368: C3V38_14770
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Entry
C3V38_14770 CDS
T05390
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dit
Dietzia sp. oral taxon 368
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dit03016
]
C3V38_14770
Enzymes [BR:
dit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C3V38_14770
Transfer RNA biogenesis [BR:
dit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C3V38_14770
Prokaryotic type
C3V38_14770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AVM65449
LinkDB
All DBs
Position
complement(3161651..3162562)
Genome browser
AA seq
303 aa
AA seq
DB search
MTPRRPDPRPAPEPGLVVVDKPGGMSSHDVVARLRRFFGTRKVGHAGTLDPMATGVLVVG
VERATKMLGMLALETKSYEATIRLGETTTTDDAQGETTATVDASAVTDTAIDAAVADLTG
EIDQVPSAVSAIKIDGRRAYDRVRSGEEVELRSRRVTVSRFDVLERVRAGAVIDLVVVVD
CSTGTYIRAIARDLGAALGVGGHLTALRRTRVGPFGLDVARTLDELEAAPTLSLDLDAAA
LAAFPRRDVDADAAEGLRHGRWLEARGDTGVVAAVGPDGRVAALVSESGRRAAPVVVMRP
AGL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccgcgtagacccgacccccgtcccgcccccgaacccggcctggtggtcgtggac
aagcccggggggatgagtagccacgacgtggtggcgcggctgcgcaggttcttcggcacc
cgcaaggtcggacacgccggcacgctcgaccccatggccacgggtgtgcttgtcgtgggc
gtcgaacgcgccaccaagatgctcggcatgctcgcgctggagacgaagtcctacgaggcg
accattcgcctcggcgagaccacgaccaccgacgacgcccagggggagaccaccgcgacc
gtggacgcctccgcggtgaccgataccgcgatcgacgcggccgtggccgatctgacgggg
gagatcgaccaggtgccgtcggcggtcagcgcgatcaagatcgacgggaggcgggcctac
gacagggtgcggtcgggggaggaggtcgagctccggtcgcggcgggtcaccgtctccagg
ttcgacgtgctcgagcgggtccgcgccggggcggtgatcgacctcgtcgtcgtcgtcgac
tgctccacggggacctacatccgcgcgatcgcccgtgacctcggcgccgcgctcggcgtc
gggggccacctcaccgccctgcgccggacccgggtcggaccgttcggcctcgacgtcgcc
cgcacgctcgacgagctggaggccgcgccgaccctgtccctcgacctcgacgcggccgcc
ctggccgcgttcccccgccgcgacgtcgacgccgacgccgccgaggggctccgccacgga
cggtggctggaagcccggggtgacaccggtgtcgtcgccgccgtggggccggacggtcgt
gtcgcggcgctggtctcggagtccggacgccgagccgctccggtcgtggtcatgcgcccg
gcggggctgtga
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