Dialister sp. UW_FK_DIAL1_1: ACFWUL_02890
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Entry
ACFWUL_02890 CDS
T11244
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
diu Dialister sp. UW_FK_DIAL1_1
Pathway
diu03030
DNA replication
diu03430
Mismatch repair
diu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
diu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFWUL_02890 (dnaE)
03430 Mismatch repair
ACFWUL_02890 (dnaE)
03440 Homologous recombination
ACFWUL_02890 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
diu03032
]
ACFWUL_02890 (dnaE)
03400 DNA repair and recombination proteins [BR:
diu03400
]
ACFWUL_02890 (dnaE)
Enzymes [BR:
diu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFWUL_02890 (dnaE)
DNA replication proteins [BR:
diu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFWUL_02890 (dnaE)
DNA repair and recombination proteins [BR:
diu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFWUL_02890 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
tRNA_anti_2
Peptidase_Mx
Motif
Other DBs
NCBI-ProteinID:
XOQ31478
LinkDB
All DBs
Position
656158..659583
Genome browser
AA seq
1141 aa
AA seq
DB search
MDPFVHLHTHTEYSLFDGTCRIKELVSHVKEMGQTAIAITDHGVMYGAVYLYKECMAQGI
KPIIGCEIYVTRGSRFEKKTGGEKEKLAHLILLAETNEGYQNLIKICSKAWTEGYYFKPR
ADHELLRQYHKGLIAMSACVGGELPQAILNRNMDEARKVIEFYIDTFGKDNYFIELQNHG
LPEEAAVRPVLARLAEEYGLGLVATNDFHYTKKEDAGSQEIKLCISTGKTLDDPYHFHFA
NNEFYCKSGKEMEEILGQYPGAIENTKKIADRCHVTLTFGEHKLPSFDVPEGETSKSYLR
KLCEAALPERYPHPTGEEKKRLDYELGVIEHMGFSDYFLIVMDFIHYAKSHGIPIGPGRG
SAAGSIVAYLLHITEIDPLRFDLLFERFLNPERVSMPDIDTDICYRRRGEVIDYLARKYG
KDQVAQIITFGTLAARAVIRDVGRVTNMPLRDVDKIAKMVPGGPGVTLKKTLDGSTEFKE
LYESNPQVHSLIDHCLDLEGLSRNSGTHAAGVVICSKPVDDYVPIQLTQDGFIQTQYEKD
QVEQLGLLKMDLLGLRNLTVIHDALEMIEANRGIHLDINKIPTEDEATCKMLCEGDTIGV
FQSESAGFTSLLMQLHPDRFEDLIPMVALYRPGPLGSGMAEDFIKRKHGEIPVEYPHPSL
EPILKETYGVILYQEQVMQIASVMGGFSLGQADMLRRAMGHKEPEILQKNRDTFVEGAVK
NGVDKKTANYVFDLMVHFAGYGFNKSHSVCYGWIAWQTAYLKAHYRPEFMAAMMTCYNSD
RDKVSRYISDTRKAGVEIAAPDVNLSEAYFSVKGNKILFGLDGIQNVGENAVNGIIEARR
KGGPFKNLNDFLERVDSKGLNSRACESLIRCGALDSMGANRSQLLAVLPEALSHAQSVRA
DRASGQMSLFGEEEEAEAMAYPDLPDMPKSEKIEWERKLLGFYVSGHPLDAFKEQMAHCT
PIYKLMAENSRYDGRMVTIGGTVTRVKSTMTKKGAPMGYVTLEDYDGDLESVVFPSVWEK
ARPLLVEDAAICLRGRVQSNEREVKILAEDIIPLSTFHKAVRPPVSAVHLYVDERHETNM
VSDGLARILLKYHGNTPVFLHMQRTGQEIRMIPKFYLDFSEEAEESLKGLLGNACVEGRR
N
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggatccattcgttcatcttcatacccatacagaatacagcctcttcgatgggacctgc
cggattaaggagctcgtatcccatgtgaaagaaatggggcagaccgccattgccatcacg
gaccacggcgtcatgtacggcgccgtgtatctctataaagaatgcatggcccagggcatc
aaacccatcatcggctgcgaaatttacgtgacccgagggagccggtttgaaaagaaaacc
ggcggggaaaaggagaaactggcccatctcatcctgctggcggaaaccaatgagggatac
cagaacctcatcaagatctgctccaaggcctggacggaagggtattatttcaagccccgg
gcggaccatgagctccttcggcagtaccacaagggcctcattgccatgtccgcctgcgtg
gggggagaactgccccaggctatcctgaaccggaatatggacgaagcccggaaggtgatc
gagttctatatcgacaccttcggaaaggataattatttcatcgagctccagaaccacggc
ctgccggaagaagcggcggtacggccggtactggccaggctggcggaagaatacggtctg
ggcctcgtggccaccaacgatttccattatacgaaaaaggaagatgccgggagccaggaa
atcaaactctgcatttccacaggaaaaacgttggacgacccctatcatttccatttcgct
aacaatgaattctactgcaagagcggaaaggaaatggaagaaattctgggccagtatccg
ggggccattgagaatacgaaaaaaatagcggaccgctgccatgtgactctcacctttggg
gaacataaactcccctcctttgacgtgccggaaggggagacgtcgaagtcctatctccgt
aaactctgtgaggctgccctgccggagcggtatccccatcctacgggagaagaaaagaaa
cggctggactatgagctcggtgtcatcgaacacatgggattttccgattacttcctcatc
gtcatggatttcatccattatgcgaaatcccacggcattcccattggccctggccgtggc
agcgccgccggcagtatcgtggcctatcttctccatattacggaaatcgatcccctccgt
ttcgatctcctctttgaacgattcctgaacccggagcgtgtatccatgccggatattgat
acggatatctgctatcgccgccggggcgaggtcattgattacctggcccggaaatacggg
aaggatcaggtggcccagattattaccttcggcaccttggcagcccgggcggtgatccgg
gatgtgggccgggtcaccaatatgcccctccgggatgtggataaaattgcgaaaatggta
cccggcggtccgggagtaaccctcaaaaagacattggacggcagtacggagttcaaggaa
ctttacgaatcgaacccccaggtccacagcctcatcgaccactgcctggatctggaaggg
ctttcccgaaattccggcacccatgcggcgggggtggtgatctgctctaagcctgtcgat
gactacgtgcccatccagctcacccaggatgggttcatccagacccagtatgaaaaagac
caggtcgaacagctgggccttctgaagatggaccttctgggccttcgaaaccttacggtc
atccatgatgcactggaaatgattgaagccaaccggggcatccatctggatatcaataag
atacctacggaagatgaagccacctgcaaaatgctctgcgaaggggataccatcggtgtc
ttccagtcggaatctgccggatttacatccctcctcatgcagcttcatccggaccggttc
gaagacctcatccccatggtggccctgtaccgcccgggccccctgggaagcggcatggcg
gaagatttcatcaaaagaaaacatggggaaatcccggtggaatacccccatccgtcgttg
gaaccgatcctgaaggaaacctacggggtcattctctaccaggaacaggtcatgcagatc
gcctccgtcatgggtggattcagccttggacaggcagatatgctgcgccgtgccatgggt
cataaggaaccggaaatcctgcagaagaaccgggataccttcgtggaaggggcagtgaag
aatggagtggacaagaagacggcaaactatgtctttgacctcatggtccactttgcagga
tacgggttcaataaatcccacagtgtctgctatgggtggattgcctggcagacggcgtac
ctgaaggcccactatcggccggaattcatggcggccatgatgacctgctataacagtgac
cgggacaaggtgagccgctatatttccgatacccggaaggcgggagtggaaatcgcggcg
cccgacgtgaacctgtcggaggcctatttctccgtaaagggaaataagatcctcttcggc
ctggacggcattcagaacgtaggggaaaatgcggtgaacgggatcatcgaagcccggagg
aaagggggacctttcaagaacctcaatgatttcctggagcgggtggacagcaagggactg
aacagccgggcctgcgagagcctgatccgctgcggtgccctggactccatgggggccaac
cggtcccagctcctggcggtcctgccggaagccctgagtcatgcccagtccgtgcgggcg
gaccgggcttccggccagatgagcctcttcggggaggaagaagaggcggaagccatggcg
tacccggaccttccggacatgccgaaaagcgagaaaatcgagtgggaaagaaaacttctg
ggcttctacgtgagcggccatcccctggatgcctttaaagagcagatggcccattgcacg
cctatttataaactcatggctgaaaacagccgctacgatggaagaatggtgaccatcggc
ggcaccgtgacccgggtgaagagtaccatgacaaagaaaggggcccccatgggctatgtg
accctggaagactacgacggggacctggagtccgtggtattcccgtcggtctgggaaaag
gcaagaccccttctcgtggaagatgcggccatctgcctccggggccgggtacagtccaac
gaaagggaagtgaaaatcctggcggaagatatcattcccctttccacattccacaaggcc
gttcgtcccccggtgagcgccgtccatctctacgtggatgaacggcatgagaccaatatg
gtgagcgacggcctggcaaggattctcctgaagtaccacgggaatacgccggtgttcctc
cacatgcagcggacgggacaggaaatccggatgattcccaagttctacctcgatttttcg
gaagaagcggaagaatccctgaaaggcctcctgggcaacgcctgcgtagagggaagaagg
aattaa
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