Dialister sp. UW_FK_DIAL1_1: ACFWUL_03955
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Entry
ACFWUL_03955 CDS
T11244
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
diu Dialister sp. UW_FK_DIAL1_1
Pathway
diu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
diu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACFWUL_03955 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
diu03400
]
ACFWUL_03955 (uvrB)
DNA repair and recombination proteins [BR:
diu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACFWUL_03955 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACFWUL_03955 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_7
AAA_25
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XOQ31682
LinkDB
All DBs
Position
929595..931703
Genome browser
AA seq
702 aa
AA seq
DB search
MDRSRIKRAYMEPMIPFTLKAPFQPTGDQPKAVKSLVDGLNEGQWAQVLLGATGTGKTFT
MAKVIEQVQRPTLIISPNKTLAAQTASEFKDFFPDNAVYYFVSYYDYYQPESYVPQTDTY
IEKDSSRNEEIDRLRHSATMALFERRDVIIVASVSCIYGLGDPEDYSTMGLSLRPGEEIE
RDKIIEKLVNMQYMRNDMNFTRDTFRVRGDTIDVFPASENNVAVRIEMFGDEVDSLTEFD
VLTGETVAERNHIGIFPASHYVTSSDKMKRAIGSIEVELEGRLKELRDQGKLLEAQRLEQ
RTNYDLEMMQEVGYCSGIENYSRHMSNRKPGEPPYTLLDYFPDDFLIMIDESHVTVPQLR
AMYNGDQSRKQTLVDYGFRLPSALDNRPLTFDEFTERINQIIYVSATPGPYEMGVQTNLA
EQIIRPTGLLDPSIEVRPVEGQMDDLLGEIHKRVEAHERVLITTLTKKMAEDLTDFLTEA
GVKVRYLHSDVATIERAEIIRDLRAGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFL
RSETSMIQVIGRAARNEHGHVIMYADRVTKSMKYAIDETNRRRSIQEAYNKEHHIVPHTV
QKRVKDLIDLTKIEEKPADYKKSDGGKEEMSDEELYMQMQQTEKDMKRAAKSLEFEEAAM
WRDQLAKLRQMWTDRYGSRADAALKRVSAGKKRINRPMKKRV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcagcagaattaagagggcctacatggagcccatgattccctttaccctgaaa
gccccgttccagcctaccggagaccagccgaaggcggtgaagtccctggtggatggcctc
aatgaagggcaatgggcacaggtccttctgggagctacggggaccggtaagacctttacc
atggccaaggtcattgaacaggtccagcggccgacgctcatcatttcgccaaataaaact
ctggcagcccagacagccagtgagtttaaggattttttcccggataatgcggtgtattac
ttcgtcagttactacgattattaccagccggaatcctatgtgccccagaccgatacgtac
atagaaaaggattcttcccggaatgaggaaatcgatcggctccgccattccgccaccatg
gccctttttgaacggcgggatgtgattattgtggcttccgtttcctgtatctatggattg
ggggatccggaagactacagcaccatggggttatccttgcggccgggagaagaaatcgaa
cgggataaaatcatcgaaaaactggtgaatatgcagtacatgcggaatgacatgaatttt
acgagggacacctttcgggtgcggggagatacgattgatgtatttcctgcatcagaaaac
aatgtggctgtgcgtatagaaatgtttggtgatgaggtggattccctcaccgaatttgac
gtgcttaccggggaaacggtggcggaaagaaaccatatcggcattttcccggcttcccac
tacgtcaccagttccgataaaatgaagcgggccatcggttctattgaagtggaactggaa
ggccggctgaaggaactccgggaccagggtaaacttctggaagcccagcggctggagcag
cggacgaattacgacctggaaatgatgcaggaagtggggtactgctcaggcatcgaaaac
tactcccgccatatgtcgaaccggaaacccggcgaaccgccgtacacgctgctggactat
ttccccgatgatttcctcatcatgatcgatgaatcccatgtcacagtcccccagctacgg
gccatgtacaacggagaccagtccagaaagcagacgctggtggactacggattccgtctc
cccagtgccctggataaccggcccctgacctttgatgaattcacggaacgaatcaaccag
attatctacgtatccgctacgccgggaccctatgaaatgggggtccagaccaatctggcg
gaacagattattcgccccacaggcctcctggatcccagcattgaagtacggccggtggaa
gggcagatggacgatcttcttggggaaatccataagcgggtagaagcccatgaacgggtg
cttattactacactcacgaagaaaatggcggaggacctcaccgatttccttacagaagca
ggagtcaaggtgcgttatctccattccgatgtggccaccattgaacgggcagaaattatt
cgggacctgcgggccggcgtctttgacgtactcgtgggcatcaacctgctccgggaaggg
ctggatatgccggaagtttccctggtggctatcctggatgcggacaaggaaggattcctc
cgttctgaaacttccatgatccaggtcattggccgggcagcccgcaatgaacatggccat
gtcatcatgtatgcagaccgggtgacgaagtccatgaaatacgccatcgacgagaccaac
cgccgccggtccatccaggaagcctataataaggaacatcacattgttccccataccgtt
cagaaacgggtcaaggaccttattgacctgacaaagattgaggaaaaaccggcggattat
aagaagtctgacggcggcaaagaagaaatgtcagacgaagaactgtatatgcagatgcag
cagaccgaaaaggacatgaaacgggccgccaagtctttggaatttgaggaagctgccatg
tggagggaccagctggccaagctgcggcagatgtggaccgaccgttacggttcccgggcc
gatgctgccctgaaacgggtgagcgccgggaaaaaacggatcaatcgccccatgaaaaag
agggtgtaa
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