Dietzia sp. JS16-p6b: CT688_01835
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Entry
CT688_01835 CDS
T05397
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz03030
DNA replication
diz03430
Mismatch repair
diz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CT688_01835
03430 Mismatch repair
CT688_01835
03440 Homologous recombination
CT688_01835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
diz03032
]
CT688_01835
03400 DNA repair and recombination proteins [BR:
diz03400
]
CT688_01835
Enzymes [BR:
diz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CT688_01835
DNA replication proteins [BR:
diz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CT688_01835
DNA repair and recombination proteins [BR:
diz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CT688_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
AAA_19
Mg_chelatase
AAA_16
AAA_14
Rad17
DnaX_C
AAA_18
DEAD
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AVZ38411
LinkDB
All DBs
Position
405753..408299
Genome browser
AA seq
848 aa
AA seq
DB search
MALYRKYRPASFAEVVGQEHVTEPLSVALSSGRINHAYLFSGPRGCGKTSSARILARSLN
CVEGPTATPCGECDSCVALAPGGTGTLDVTELDAASHGGVDDTRDLRERAFFAPASSRYR
VLIIDEAHMVTNAGFNALLKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLTPS
AMRGLLERVCDQEGVRVEPTVFPLVIRAGGGSPRDTLSVLDQLMAGAGEEGITYSRAVSL
LGATEAALIDDTVDALAASDGATLFRTVDKVIEAGLDPRRFAADLLQRLRDLIMVQSVPQ
AIERGLVDAPVEQADTMRRQAENIGPATLARCADMVHEGMGSMRGATSPRLLLEILCAKL
LLPSADDSVLALLQRVEALETGTARSVAAPGGGVPVREGNPAGAGGGLADDDEGRVGSGG
PGPQPSTQPEGRPKFVRRSQAQPAEPAARQEAQGSTSGPRASASAPQPPAPASHERGSKP
PAQEPEPHPQEPGTRPVQATPDGSAVPAESIAQQLAESQRPAGEAADTGPESAQPVHAGP
DSPSAHHAPGSAPVSAPTPGPEPASAAAPTPGSEPAPTPEPVADPWREPPAEPGDAADQA
SGRGPEHARDEPREQPRAQTDAGTGRAPAPEPGPPAAPGMEAEDIRRAWPAIRDAVRRRT
RTVEVMLAGATVAGVEGRVIHLVHDYAPLAKRLAQPHNATAITDSVTEVVGGDWTIRCTS
GGGGAVSSEGAPVRGAAPAPTEAPGKPQQAEPQGWQRRLRGGDPGRGAGSGGAADGGAPG
GGYDDIPPPPEEPEPEAGEPDGPPPPPVSEEEMVDEARSGPQNLDHRTGEDIALQLLREH
LGARPLER
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
gtggccctctaccggaagtaccgccccgcctccttcgccgaggtcgtgggccaggagcac
gtcaccgagccgctctccgtggcattgtcctccggccggatcaaccacgcgtatctcttc
tccgggccgcgcgggtgcggcaagacctcgtccgcccgcatcctcgcccggtcgctgaac
tgcgtggagggacccaccgcgacaccctgcggggagtgcgactcctgcgtggcgctcgcg
cccgggggcacgggcacgctggacgtcaccgagctcgacgcggccagccacggtggtgtg
gacgacacccgtgacctgcgtgagcgggcgttcttcgcaccggcgtcgtcgcggtaccgg
gtgctcatcatcgatgaggcgcacatggtcaccaacgcgggcttcaacgcgctgctcaag
atcgtggaggagccgccggagcacctcatcttcatcttcgccaccaccgagccggagaag
gtgctgccgacgatccgttcacggacgcaccactacccgttccgcctgctcacgccctcg
gcgatgcgtggacttctcgagcgggtctgcgaccaggagggcgtgcgggtcgagccgacc
gtcttcccgctggtcatccgcgccggtggggggtcgccgcgcgatacgttgagcgtgctg
gaccagctgatggccggcgcgggcgaggagggcatcacctattcgcgcgcggtgagtctt
ctgggggccaccgaggcggcgctgatcgacgacaccgtggacgccctcgccgcctccgac
ggtgcgacgctgttccggaccgtcgacaaggtcatcgaggcagggctcgatccccgccgg
ttcgcggcggacctgctgcagcgtctgcgagatctcatcatggtgcagtctgtcccccag
gccatcgagcgcggcctcgtcgacgcgccggtcgagcaggccgacaccatgcggcggcag
gccgagaacatcggccccgccaccctcgcgcggtgcgcggacatggtgcacgaggggatg
gggtcgatgcgcggcgccacctctccgcggctgctgctggagatcctctgcgccaaactg
ctgctgccgtcggccgacgactcggtgctcgcgctgctgcagcgcgtcgaggcgctggag
accggtacggcgcgatcggtcgccgccccgggtggcggggtccccgtccgggaggggaac
ccggccggagccggcggagggctggctgacgacgacgaggggcgcgtgggatcgggcggc
cccgggccgcagccctccacccagccggaggggcggccgaagttcgtgcgccgttcccag
gcgcagcccgccgagcctgccgcccgtcaggaggctcagggctccacgtcggggccccgg
gcatccgcgtcggcgccgcagccgcccgcgccggcgtcgcacgaacgtgggtcgaagcca
cccgcgcaggaacccgagccgcatccgcaggagcccggaacccgtccggtgcaggccact
cccgacggatcggccgtgcccgccgagtccatcgcccagcaactggcggagagtcagcgg
ccggccggtgaggccgcggataccggcccggagtccgcacagccggtccacgccggtccc
gactcgccttcggcccaccacgcacccgggtccgcacccgtctccgcgcccacgcccggg
cccgaacccgcctccgccgccgcacccactcccgggtccgaacccgcccccacccccgag
ccggtggcggatccgtggcgagagccgcccgccgagcccggagatgccgcggaccaagcg
agcggccgaggtccggagcacgcccgggacgagcctcgggagcagccacgagcgcagacc
gacgccggcacaggccgcgcaccggcgcctgaacccgggccccctgccgccccgggaatg
gaggccgaggacatccgccgcgcgtggccggctatccgcgacgcggtccggcggaggacc
cgcacggtcgaggtgatgctcgccggcgcaaccgtcgcaggggtcgagggccgggtcatt
catctcgtccacgactacgccccgctggccaagcgactggcccagccgcacaacgccacc
gcgatcaccgactcggtcaccgaggtggtgggtggggactggacgatccgctgcacctcg
ggcggagggggtgccgtgtcctcggagggcgccccggtccgcggggccgccccggctccg
acggaggcgcccggaaagccgcagcaggccgagccccaggggtggcagcgtcggctgcgt
ggaggagaccccggccggggtgcgggatccggaggcgccgccgacggtggagcgcccggg
ggcgggtacgacgacatcccgccgccgccggaggagcccgagccggaggccggggagccc
gacggcccgccgccacccccggtgagcgaggaggagatggtggacgaggcccgcagcgga
ccccagaaccttgatcaccggaccggcgaggacatcgcgctccagttgctcagggagcat
ctcggggcccggccactcgagcgctga
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