Dietzia sp. JS16-p6b: CT688_01960
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Entry
CT688_01960 CDS
T05397
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz03030
DNA replication
diz03430
Mismatch repair
diz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CT688_01960
03430 Mismatch repair
CT688_01960
03440 Homologous recombination
CT688_01960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
diz03032
]
CT688_01960
03400 DNA repair and recombination proteins [BR:
diz03400
]
CT688_01960
Enzymes [BR:
diz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CT688_01960
DNA replication proteins [BR:
diz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CT688_01960
DNA repair and recombination proteins [BR:
diz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CT688_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AVZ38432
LinkDB
All DBs
Position
433131..434072
Genome browser
AA seq
313 aa
AA seq
DB search
MSGWVVVDVETSGMRPSVDRVLSVAAVVIDDDGEVLEEFVTLLNPGVDPGPVHVHGLTPA
LLAGKPRYADVAADLARVLDGRTVVAHNATFDASFLASEARRAGLEPPLEQFLCTLDFAG
RLHLSTADLKLVTLAAHFGVEQRAAHDAHDDALVLAGVFAGMLQVAAAKAVQPTVRRLDG
MVADPETGFLVSRVWAEALAAPRLWRPAGRLKRGGGLVQGMEVVFTQDVDRDPEEIAGLV
VDAGLYLADRISSRTSLAVCDAPGAVRGRAAFARKKGLELVPFARFSEMLADVAPGRPVA
GAQAVDSAQEALF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtgggtggtggtggacgtcgagacgtccgggatgagaccgtccgtcgaccgg
gtgctgtcggtggcggcggtggtgatcgacgacgacggcgaggtgctcgaggagttcgtg
actctgctgaacccgggtgtcgacccggggccggtccacgtgcacggcctcaccccggcc
ctgctcgcgggcaaaccgcgctacgccgacgtggccgcggacctggcgcgggtgctcgac
ggccggacggtggtggcccacaacgccacgttcgacgcgtccttcctggcctcggaggcg
cggcgggccggactcgagccgccgttggagcagttcctgtgcacgctggacttcgcgggc
cggctccatctgtccaccgccgacctcaagctggtcacgctcgccgcgcacttcggcgtg
gagcagcgggccgcgcacgacgcccatgacgacgcgctggtgctggccggggtgttcgcg
gggatgctgcaggtcgccgcggccaaggccgtgcagccgacggtgcggcgcctcgacggg
atggtggcggatccggagacgggcttcctcgtctcccgcgtgtgggccgaggccctggcc
gcgcccaggctctggcggccggccggacggctgaagcgaggcggcgggctggtgcagggg
atggaggtggtcttcacccaggacgtcgaccgcgacccggaggagatcgccggcctcgtc
gtcgacgcaggtctctacctggccgaccgcatctcctcccgcacctcgctggccgtgtgc
gacgcgcccggcgcggtccggggccgcgccgccttcgcccgcaagaaggggctcgaactg
gtcccgttcgcccggttctccgagatgctcgccgacgtggcgcccgggcggcccgtcgcg
ggtgcccaggcggtggacagcgcgcaggaggcgctcttctga
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