Dietzia sp. JS16-p6b: CT688_02465
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Entry
CT688_02465 CDS
T05397
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz02020
Two-component system
diz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CT688_02465
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CT688_02465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
diz03000
]
CT688_02465
Transcription factors [BR:
diz03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CT688_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
GntR
HTH_3
Crp
Sigma70_r4
MarR_2
wHTH-PRTase_assc
Sigma70_r4_2
HTH_24
HTH_29
HTH_28
HTH_23
HTH_IclR
MarR
HTH_Cmi2_C
DUF6950
DUF977
YfeC-like
Motif
Other DBs
NCBI-ProteinID:
AVZ38520
LinkDB
All DBs
Position
complement(547372..548076)
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AA seq
234 aa
AA seq
DB search
MTIDRRTDQSADDVLTRAGIFQGVEPAAISALRADLTREEYSKGDVIIREGEQGDSLYIV
TSGKVKLSRKAPDGRENLLSILGPSDMFGELSIFDPGPRTSSAVCVTDVSVQSMDRSALK
RWISERPEISDQLLRVLARRLRRTNNNLADLIFTDVPGRVAKALLQLAQRFGTQEGGNIR
VTHDLTQEEIAQLVGASRETVNKALAEFAHRGWLRLEGKSVIISDTERLARRAR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatagatcgccgcacggaccagtcggccgacgacgtactcacccgggccggcatc
ttccagggtgtcgagcccgcggccatctcggcgctgcgtgccgacctgacccgcgaggag
tactcgaagggtgatgtgatcatccgcgagggcgagcagggcgacagcctctacatcgtc
acgtcgggcaaggtgaagctctcccgcaaggccccggacggtcgcgagaacctgctgtcc
atcctcggcccctcggacatgttcggtgagctgtcgatcttcgacccgggcccgcgcacc
tcgtccgcggtctgcgtcaccgacgtctccgtgcagtccatggaccgctcggccctcaag
cggtggatctccgagcggcccgagatctccgatcagctgctgagggtgctcgcccgccgt
ctgcgccgcaccaacaacaacctcgccgacctcatcttcaccgatgtgcccggtcgcgtg
gccaaggcgctgctgcagctggcccagcgcttcggcacccaggagggcggcaacatccgc
gtgacgcacgacctcacgcaggaggagatcgcccagctcgtcggcgcctcccgcgagacg
gtcaacaaggccctggccgagttcgcacaccggggttggctgcgcctcgaaggcaagagc
gtcatcatctccgacaccgagcgcctggcccggcgcgcccgctga
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