Dietzia sp. JS16-p6b: CT688_02585
Help
Entry
CT688_02585 CDS
T05397
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
diz
Dietzia sp. JS16-p6b
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
diz03032
]
CT688_02585 (topA)
03400 DNA repair and recombination proteins [BR:
diz03400
]
CT688_02585 (topA)
Enzymes [BR:
diz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CT688_02585 (topA)
DNA replication proteins [BR:
diz03032
]
Prokaryotic type
DNA Topoisomerases
CT688_02585 (topA)
DNA repair and recombination proteins [BR:
diz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CT688_02585 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Rep_1B
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
AVZ38535
LinkDB
All DBs
Position
571975..574986
Genome browser
AA seq
1003 aa
AA seq
DB search
MASKQTASGGKRSLVIVESATKARKIQPYLGSDYVVEASVGHIRDLPKGAADIPAKYKKE
PWARLGVDPEHNFEPIYVVSADKKKKVSELKKELAGVDQLLLATDPDREGEAIAWHLLEV
LKPKVPVKRMVFHEITKPAILAAAENTRELDTDLVDAQETRRILDRLYGYEVSPVLWKKV
MPRLSAGRVQSVATRVIVERERERMAFVAADYWDITATLTTREAAGGDAGEPRSFTARLA
AVDGARVAQGRDFGQDGRLKTSGAAKDAVVLDESAARALSDALDGADFVVDSVESKPYTR
RPYAPFMTSTLQQEAGRKLRYTSERTMRIAQRLYENGYITYMRTDSTTLSEGGIAAARAQ
ATELYGSEYVSPTPRQYTRKVKNSQEAHEAIRPAGESFATPGQLHGVLDAEEYRLYELIW
QRTVASQMADAKGTSVSIRITGAAGQNPSGYERATFAASGRTITFPGFLKAYVEATEEPG
ESSDKPMADDAERRLPRLSEGQDLTGSDLSADGHTTSPPARYTEASLVKVMEEMGIGRPS
TYASIIRTIQDRGYVYSRGNALVPSWVAFAVVGLLEQNFGRLVDYDFTSLMEDELDEIAE
GRENRDDWLRRFYFGDPGASGPDGGAGDAGHAVGLKNLIDVNLEAIDARSINSIRVFDDA
EGRPVHVRVGRYGPYLERMVAGEDGEQESQRANLPEGMSPDELTLEVAEKLFATPQDGRP
LGVDPETGHEIVVKDGRFGPYVTEKLPEPTDEEKARWAEKVLADAEAEKKRIDAERDAAI
AAAENDEARAEAKKAATKAKSAVTRKAKKESDNPTGPKPRTGSLMQSMEPATITLEEALK
LLSLPRTLGVDPASGEEITAQLGRYGPYLRKGTDSRTLDTEDAVFTITLEEALKIYSEPK
RRGRQAAAPKALREMGVDEVSGKQMLVKDGRFGPYVTDGESNASLRKGDTVETLTDARAS
ELLSERRAKSPPPKKAAAKKAGGKATKKAPARTSPAKKATAGR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagcaagcagacagcatcgggcgggaagcggagcctggtgatcgtcgagtccgcc
accaaggcccgcaagatccagccgtacctggggtccgactacgtggtcgaggcgtccgtc
gggcacatccgcgacctgcccaagggggccgccgacatcccggccaagtacaagaaggag
ccctgggcccgactgggcgtggacccggagcacaacttcgagccgatctacgtggtgagc
gcggacaagaagaagaaggtctcggagctcaagaaggagctggcgggcgtggaccagctc
ctgctggccaccgacccggaccgcgagggcgaggcgatcgcctggcaccttctcgaggtg
ctcaagcccaaggtcccggtcaagcggatggtgttccacgagatcaccaagccggccatc
ctcgccgccgccgagaacacccgcgagctggacacggacctcgtcgacgcccaggagacc
cgccggatcctcgaccgtctctacggctatgaggtctctcctgtgctgtggaagaaggtc
atgccgcggctatcggcgggtcgcgtgcagtccgtggccacccgcgtgatcgtcgagcgg
gagcgggagcgcatggcgttcgtcgcggccgactactgggacatcaccgcgaccctgacg
acccgcgaggccgccggtggcgacgccggtgagccgcgcagcttcaccgcccgcctcgcc
gcggtggacggcgcccgggtggcgcaggggcgcgatttcggccaggacggtcgactcaag
acctccggcgcggccaaggacgcggtggtgctcgacgagtccgcggcccgcgcgctgtcg
gacgcgctggacggcgccgacttcgtcgtcgactccgtcgaatccaagccgtacacccgc
cgcccctacgcgccgttcatgacctcgacgctgcagcaggaggccggccgcaaactgcgc
tacacgtccgagcgcaccatgcgcatcgcgcagcggttgtacgagaacggctacatcacc
tacatgcgcaccgactccaccaccctgtccgagggcggcatcgcggccgcccgcgcgcag
gccacggagctgtacggcagcgagtacgtctcgcccaccccgcggcagtacacccgcaag
gtcaagaactcgcaggaggcgcacgaggccatccgtccggcgggggagtccttcgccacc
cccggccagctgcacggcgtcctggacgccgaggagtaccgcctgtacgagctcatctgg
cagcgcaccgtcgcctcccagatggccgacgccaagggcacctcggtgagcatccgcatc
acgggcgccgcgggacagaacccgtccgggtacgagcgggcgaccttcgcggcctcgggc
cgcaccatcacgttccccggtttcctcaaggcctacgtggaggcgaccgaggagcccggt
gagtcctcggacaagccgatggcggacgacgccgagcggcgactgccgcgactgagcgag
gggcaggacctcacggggtcggacctgtccgccgacggccacaccaccagccccccggcc
cgctacaccgaggcgagcctggtcaaggtcatggaggagatggggatcggccgcccctcg
acctatgccagcatcatccgcaccatccaggaccgcggctacgtgtactcccggggcaac
gcgctcgtgcccagctgggtggccttcgccgtggtcgggctgctcgagcagaacttcggt
cggttggtggactacgacttcacctcgctcatggaggacgagctcgacgagatcgccgag
gggcgcgagaaccgggacgactggctgcgtcgtttctacttcggggaccccggcgcgtcc
gggcccgacggtggcgccggggacgcgggccacgcggtcgggctcaagaacctcatcgac
gtcaacctcgaggcgatcgacgcccgcagcatcaactccatccgggtcttcgacgacgcc
gagggacgaccggtccacgtccgcgtcgggcggtacggtccgtacctcgagcgcatggtc
gcgggggaggacggcgagcaggagtcgcagcgcgccaacctgccggaggggatgagcccc
gacgaactcacgctcgaggtggccgagaaactcttcgccaccccgcaggacgggcgtccc
ctcggtgtggacccggagaccggtcacgagatcgtggtcaaggacggccgcttcgggccc
tacgtcaccgagaagctgcccgagcccaccgacgaggagaaggcacggtgggcggagaag
gtgctcgccgacgccgaggcggagaagaagcgtatcgacgccgaacgcgacgccgcgatc
gccgccgcggagaacgacgaggccagagccgaggccaagaaggcggcgacgaaggccaag
tccgccgtgacccgcaaggccaagaaggaatccgacaaccccacgggccccaagccccgg
accggatcactgatgcagtccatggagccggccacgatcacgctggaggaggcgctcaag
ctgctgtcactgccgcggaccctgggcgtcgaccccgcgagcggcgaggagatcaccgct
cagctcggtcggtacggtccctacctgaggaagggcaccgactcgcggacactggacacc
gaggacgccgtgttcaccatcaccctcgaggaggctctgaagatctactcggagcccaag
cgtcggggtcggcaggccgccgcccccaaggcgctgcgcgagatgggggtcgacgaggtc
tccggcaagcagatgctggtcaaggacgggcgcttcgggccgtacgtcaccgacggtgag
tcgaacgcgtcgctgcgtaagggcgacaccgtggagaccctcaccgacgcgcgcgcctcg
gaactgttgtccgagaggcgggccaagtcgccgccgcccaagaaggccgcggcgaagaag
gccgggggaaaggcgacgaagaaggccccggcccggacgtcaccggcgaagaaggccacc
gcgggacgctga
DBGET
integrated database retrieval system
