Dietzia sp. JS16-p6b: CT688_02860
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Entry
CT688_02860 CDS
T05397
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CT688_02860 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
diz01007
]
CT688_02860 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
diz03016
]
CT688_02860 (lysS)
Enzymes [BR:
diz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CT688_02860 (lysS)
Amino acid related enzymes [BR:
diz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CT688_02860 (lysS)
Transfer RNA biogenesis [BR:
diz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CT688_02860 (lysS)
Prokaryotic type
Other AARSs
CT688_02860 (lysS)
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AVZ38576
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Position
631078..632715
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AA seq
545 aa
AA seq
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MTDTTPAAPGAASTEPADDTPEQVRIRRDKRQRILDSGVDAYPVGVPRTHGLVEIASDPR
FVALEPGEETDVVVSVAGRVLFVRNTGKLCFVRLQDGVSPEADLSVPAAEGEPDPFAPQL
QAMLSLANVGEERLEAWKQDVDLGDHVSVTGRVVRSKRGELSVMADSWVLAAKSLRPLPV
AHKELSEDTRVRQRYTDLIMRDTARRNAVTRIKVVRALRAALDRRGFLEVETPMLQTLHG
GAAARPFVTHSNALDLDLYLRIAPELYLKRCVVGGIERVFEINRNFRNEGVDSSHSPEFA
MLETYQAYGDYDTSATMIREVIQEVALEVFGSTTVTLADGTEYDLGGQWREMRMYPSLNE
ALRATHPELVNGDDDEDAVTVDSTVDELTELAGRVGLEVPSGRGWLHGKLVEELWEHLCG
DQLDGPVFVRDFPVETSPLTRDHRTDRGVTEKWDLYVRGFELATGYSELVDPVIQRRRFE
DQARLAAAGDDEAMVLDEDFLAAMEQGMPPTTGLGMGIDRLLMALTGLGIRETILFPMVK
PLPRD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacacgactcccgccgcgcccggggccgcctcgaccgagcccgccgacgacacc
cccgagcaggtgcgtatccgtcgcgacaagcggcagcggatcctcgactccggcgtcgac
gcctatccggtcggggtcccccgcacgcacgggctcgtcgagatcgcctcggatccgcgc
ttcgtcgcactcgagccgggggaggagaccgacgtcgtggtctcggtggccggccgggtc
ctgttcgtccgaaacaccggcaagctctgcttcgtccgactccaggacggtgtgagcccc
gaggcggacctgtccgtcccggcggccgagggcgagcccgatccgttcgccccgcagttg
caggcgatgctctcgctcgccaacgtgggcgaggaacggctcgaggcgtggaagcaggac
gtggacctgggtgatcacgtctcggtgaccggccgcgtggtgcgctccaagcggggcgag
ctgtccgtcatggcggactcgtgggtgctggcggccaagtcgctccggccgcttccggtg
gcgcacaaggagctgagcgaggacacgcgggtccgtcagcgctacaccgacctcatcatg
cgagacacggcccggcgcaacgcggtcacccgtatcaaggtcgtccgggcattgcgcgcc
gccctcgaccggcgggggttcctcgaggtggagacgcccatgctgcagacgctgcacggc
ggcgccgccgcccggcccttcgtcacccactccaacgccctggacctcgacctgtacctg
cggatcgcccccgagctctacctcaagcggtgcgtggtgggcgggatcgagcgggtcttc
gagatcaaccggaacttccggaacgagggcgtggactcctcgcacagccccgagttcgcg
atgctcgagacctaccaggcctatggggactacgacacctccgccacgatgatccgtgag
gtcatccaggaggtggcgctcgaggtcttcggttccaccacggtgaccctggccgacggc
accgagtacgacctcggcgggcagtggcgcgagatgcgcatgtacccgtccctcaacgag
gcgctgcgcgccacgcaccccgagctggtgaacggtgacgacgacgaggacgccgtcacg
gtcgactcgacggtcgacgaactcaccgaactggccggcagggtcgggctcgaggtcccc
agcggcagggggtggctgcacggcaaactcgtcgaggagctgtgggagcacctgtgcggc
gatcagctggacggtcctgtcttcgtccgagacttccccgtggagacctcgcccctgacc
cgcgaccaccgcacggaccgcggggtcaccgagaagtgggacctctacgtccgtggattc
gagctggcgaccgggtactcggagctcgtcgacccggtgatccagcggcggcgcttcgag
gatcaggcgcggttggcagcggcgggtgacgacgaggcgatggtcctcgacgaggacttc
ctggcggccatggagcaggggatgccgcctaccaccgggttgggaatggggatcgaccgc
ctgctcatggcgctcaccggactggggatcagggagacgatcctgttcccgatggtcaag
ccgctgccgcgggactga
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