Dietzia sp. JS16-p6b: CT688_04320
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Entry
CT688_04320 CDS
T05397
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
diz
Dietzia sp. JS16-p6b
Pathway
diz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
diz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CT688_04320 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
diz03400
]
CT688_04320 (xth)
Enzymes [BR:
diz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CT688_04320 (xth)
DNA repair and recombination proteins [BR:
diz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CT688_04320 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AVZ38822
LinkDB
All DBs
Position
953476..954321
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AA seq
281 aa
AA seq
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MSLTISTVNVNGIRAAVKQRSETNLGFLPWLEGSGADVVALQEVRADEDQTRKALAPALD
AGWHLVGSASSLKGRAGVALLSRHEPAEVRIGHGDPEFDESGRYIEAVYPGAVDGETVTV
ASLYLPSGSADTPKQDEKDRFMASFREHLAESAEVVGARDGHEMIVCGDWNIAHREADLK
NHKGNHKSSGFLPHEREWMSELFADGSGWTDIVRHRRPDEIGPYSWWSQRGKAFDNDAGW
RIDYHVVTDGLVERAVADRVDRASAYDRRWSDHAPVTVVYE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctcaccatcagcaccgtcaacgtcaacgggatccgtgccgccgtcaagcagcgg
tcggagaccaacctcggattcctgccctggctggagggcagcggcgccgacgtggtcgcg
ctccaggaggtccgcgccgatgaggaccagacccgcaaggccctggccccggccctcgac
gccgggtggcatctggtcggctcggcctcctcgctcaagggccgggccggcgtggcgctg
ctgtcccgtcacgagcccgccgaggtgcgcatcggtcacggcgacccggagttcgacgag
tccggtcgctacatcgaggccgtgtaccccggcgccgtcgacggggagacggtcaccgtg
gccagcctctatctgccctcggggtcggccgacacccccaagcaggacgagaaggaccgc
ttcatggcgagcttccgggagcatctggccgagagcgcggaggtcgtcggcgcccgggac
ggtcacgagatgatcgtctgcggtgactggaacatcgcccatcgcgaggcggatctgaag
aaccacaagggcaaccacaagagctccggcttcctgccccacgagcgcgagtggatgtcc
gagctgttcgccgacggcagcgggtggacggacatcgtccgccatcgccgccccgacgag
atcggcccgtactcctggtggagccaacggggcaaggccttcgacaacgacgcgggctgg
cgcatcgactaccacgtggtgaccgacgggctggtcgagcgcgccgtggccgaccgggtg
gatcgcgcgagcgcctacgacaggcggtggtccgaccacgcgccggtgaccgtcgtctac
gagtga
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